Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00416 ATGAGCAAAACAAAACAAGAGTCTGCCGGAATATCCATTTCCGGCAACCGTATTCCCATGTCCAAGAAGAACAAGAAGCTCTTCTTCTTCTCTCTCGTTGCCACCCTACTCCTCATCTCCGCCATCATCGGCCTTGTCGTCGGAGTTAACTCCCGGAAAAACTCCGGCCACAGCGATGGCCTCCACAATGTCCATTCAAGTATGGCACACGCCATCGTCAAAAGCGCTTGTAGTTCCACCATGTACCCTGAACTCTGCTTCTCCGCCGTCGTGGCCGAACCCGGCTTCGCCAAGAAAGTCGCCACCAACAAAGACGTCATAAAACTGTCTCTCAACATAACCATCAGAGCCGTACAACGCAACTACTTCGCTGTCAAGAAGCTGATCCAAACCAGAAAAGGCCTTACAAAGAGAGAGAAAACCGCTCTCCACGATTGCTTAGAAACCATTGACTACACCTTGGACGAGCTTCACCGGGCCATTGCCGACCTCGATGACTCCGCCCATCATCACGCCGAGGACCTCAAGACTCTCATCAGCGCCGCCATAACTAACCAAGAGACCTGCCTCGACGGCTTCTCCCACGACAGCGCTGATAAAAAGGTGAGACAAGGGCTGATTGACGGTCAACTTCACGGGGAGCGCATGTGCAGCAACGCGCTAGCGATGATCAAGAACATGACCGATGGTGACGCGTCGTCGTCGTCGATGAGTAATAGAAAACTGGGAGAAGTGGATGAAGTATCCGACGATGGGGTTAGTTGGCCGGAGTGGATGTCGGCCGGAGACAGGAAGCTTCTGCAAGCGACTACGGTGACTCCAAATGTGGTGGTGGCGGCGGACGGGAGTGGGAATTATAGGACAGTGTCGGAGGCTGTGGCAGCGGCGCCGGAGGGGAGCGCGACGAGGTATGTGATAAGAATAAAAGCAGGGGTGTACAGAGAGAACGTGGAGGTGACGAAGAAGAAGACGAATATAATGTTTGTGGGAGATGGAAGAACCAGCACCATCATTACCGGTAACAGAAATGTCGTCGATGGAAGCACAACCTTTCACTCCGCCACTGTAGCCGTTGTAGGAGAACGATTCTTGGCTCGAGATATAACCTTCCAAAACACGGCGGGTCCGTCGAAGCACCAAGCAGTGGCTCTCAGGGTGGGAGCTGACCTCTCCGCCTTCTACCGGTGCGACGTGCTCGCCTATCAGGACTCACTATACGTCCACAGCAACCGCCAGTTCTTCGTGAGTTGCCTAATAGCAGGCACCGTCGACTTCATCTTCGGCAACTCCGCCGCCGTCTTACAGAACTGTGACATCCACGCCCGCCGCCCTAACTCGGGCCAAAGAAACATGGTCACCGCACAAGGCAGAGTCGACCCTAACCAGAATACTGGCATCGTCATCCAAAACTGCAGAATCGGTGCCACCCAGGATCTGTTGGCAGTGAAGGGGAGCTTTGAGACGTACCTAGGGAGGCCATGGAAGGAGTATTCGAGGACAGTGATAATGAAGAGTGAAATAAGCGACGTGATACACCCAAGTGGGTGGTTCCCTTGGGATGGGAATTTTGCACTGAACACTCTATTCTATGGGGAGTATCAGAATACAGGATCTGGTGCTGATACTTCTGCAAGAGTTAACTGGCAAGGATTTAGGGTTATTACAAGTGCCACTGAAGCTCAAAGTTTCACTCCTGCTAACTTCATTGCAGGCTCAAGCTGGTTGCCTTCTACAGGTTTTCCATTTACACTGGGCCTGTGA 1761 0.5258 MSKTKQESAGISISGNRIPMSKKNKKLFFFSLVATLLLISAIIGLVVGVNSRKNSGHSDGLHNVHSSMAHAIVKSACSSTMYPELCFSAVVAEPGFAKKVATNKDVIKLSLNITIRAVQRNYFAVKKLIQTRKGLTKREKTALHDCLETIDYTLDELHRAIADLDDSAHHHAEDLKTLISAAITNQETCLDGFSHDSADKKVRQGLIDGQLHGERMCSNALAMIKNMTDGDASSSSMSNRKLGEVDEVSDDGVSWPEWMSAGDRKLLQATTVTPNVVVAADGSGNYRTVSEAVAAAPEGSATRYVIRIKAGVYRENVEVTKKKTNIMFVGDGRTSTIITGNRNVVDGSTTFHSATVAVVGERFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDVLAYQDSLYVHSNRQFFVSCLIAGTVDFIFGNSAAVLQNCDIHARRPNSGQRNMVTAQGRVDPNQNTGIVIQNCRIGATQDLLAVKGSFETYLGRPWKEYSRTVIMKSEISDVIHPSGWFPWDGNFALNTLFYGEYQNTGSGADTSARVNWQGFRVITSATEAQSFTPANFIAGSSWLPSTGFPFTLGL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00416 586 ProSitePatterns Pectinesterase signature 1. 300 319 IPR018040 -
Accr7g00416 586 PANTHER PECTINESTERASE 42 576 - -
Accr7g00416 586 ProSitePatterns Pectinesterase signature 2. 419 428 IPR033131 -
Accr7g00416 586 Pfam Pectinesterase 275 571 IPR000070 GO:0030599|GO:0042545
Accr7g00416 586 CDD PMEI-like_3 75 228 - -
Accr7g00416 586 SMART PMEI_2 68 223 IPR006501 GO:0004857
Accr7g00416 586 NCBIfam pectinesterase inhibitor domain 69 227 IPR006501 GO:0004857
Accr7g00416 586 Pfam Plant invertase/pectin methylesterase inhibitor 72 223 IPR006501 GO:0004857
Accr7g00416 586 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 228 IPR035513 -
Accr7g00416 586 Gene3D - 269 586 IPR012334 -
Accr7g00416 586 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 228 IPR035513 -
Accr7g00416 586 SUPERFAMILY Pectin lyase-like 270 585 IPR011050 -
Accr7g00416 586 FunFam Pectinesterase 69 228 - -
Accr7g00416 586 FunFam Pectinesterase 269 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00416 Accr-Chr7 5513780 5534698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00416 22 586 Carbohydrate Esterase AT3G14310 66.610 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00416 K01051 - cave:132186541 840.876