Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00412 ATGGGTGACTCGTTAGTGTCTAATGACAAATTGGGCGAATCTCCCGCAGTTGAAGTGGCGGGAAAAATCATGGTGCCTATGATAATCCTCTTCATGGTGGCTGTGTTTGTTCTGTTTCTCCATCTCTACGTCAAATGGTTCTGGGGGAGAATTGAAGAAACCACTCCTCAGCCGCCGACTCGCCGCCGCCGTCGACGCCGCTTTGTCTTCAACCCGGGGCAAGATCCGGCGATTTACGGCGGCCAGAGAAGTGGGTTTGATCCTTCAGTGCTTTTGTCCTTACCCGTTGTAGTGTACCAACCTGAAAATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTCTCTGAGCTTGTTGAAGGAGAAAAAGCGAGGCTTTTACCCAACTGTAATCATGGTTTTCATGTGGATTGTATAGATATGTGGTTTCAATCCCATTGTACTTGTCCACTTTGCAGGGACCCAGTTGCTTCTGAAACCCCTAAATGCAATAGCACTTCAAGTGTTGGAGAAAATTCCGCAGAGAATATTGGTAGGCAATCACAAGCGGTAGAAAATTTTCAAAACTCAGGTTTTGCTGCTATGAGTGGTTCAGAGTCTCCAAATTTTCCAACTAATGTGTTGGTTTGGGGGAACCAGACTCAAGTTTGTTCTATTAATACATCTTCGGAAGAAGAGGGTCCTTCATCTTCTTCTACAACTACAGCTAGCAGTAGCAGTAACAGTAACAACAATAGACGCCATGAAATGATGGTGATTGATATACCAAGTGAGGTCAATTCTTCATCTTTGTCTCCTTCTGCAAGCAGGTTTGCTGAAGATGAGCTGAAATCACCAATGACCACAAGATTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTGCTTGTAATCCTGGTCCCGGCTCTATAGATGTTGAACAAGCAGGGAGCGGACAAAGCTAG 951 0.4501 MGDSLVSNDKLGESPAVEVAGKIMVPMIILFMVAVFVLFLHLYVKWFWGRIEETTPQPPTRRRRRRRFVFNPGQDPAIYGGQRSGFDPSVLLSLPVVVYQPENFKDGLECAVCLSELVEGEKARLLPNCNHGFHVDCIDMWFQSHCTCPLCRDPVASETPKCNSTSSVGENSAENIGRQSQAVENFQNSGFAAMSGSESPNFPTNVLVWGNQTQVCSINTSSEEEGPSSSSTTTASSSSNSNNNRRHEMMVIDIPSEVNSSSLSPSASRFAEDELKSPMTTRLRSLKRLLSRDKRLGACNPGPGSIDVEQAGSGQS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00412 316 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 157 IPR013083 -
Accr7g00412 316 Pfam Ring finger domain 109 152 IPR001841 -
Accr7g00412 316 SUPERFAMILY RING/U-box 93 158 - -
Accr7g00412 316 MobiDBLite consensus disorder prediction 219 316 - -
Accr7g00412 316 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 23 271 - -
Accr7g00412 316 SMART ring_2 110 151 IPR001841 -
Accr7g00412 316 MobiDBLite consensus disorder prediction 219 247 - -
Accr7g00412 316 CDD RING-H2_EL5-like 109 152 - -
Accr7g00412 316 ProSiteProfiles Zinc finger RING-type profile. 110 152 IPR001841 -
Accr7g00412 316 FunFam RING-H2 finger protein ATL3 79 157 - -
Accr7g00412 316 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00412 Accr-Chr7 5486906 5487856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00412 1 294 C3H Transcription Factor Family AT1G53820 42.444 3.74e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00412 - - qsa:O6P43_027473 313.923