Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00411 ATGGGTGACTCGTTGGTGTCTAATGACAAATTGGGCGAATCTCCCGCAGTTGAAGTGACGGGAAAAATCACGGTGCTAGCTATGATAATCCTCTTCATGGTGGTTGTGTTTGTTCTGTTTCTCCATCTCTACGCCAAATGTTTCTGGGAGAGCATTGAAGAAACCACTGCTCCGCCAACGACTCGCCGCCGCCGTCGACGCCGCTTTGTCTTCAACCCGGGGCAAGATCCGGCGATTTACGGCGGCCAGAGAAGTGGGCTTGATCCTTCAGTGCTTTTATCCTTACCAGTTGTAGTGTACCAACCTGAAAATTTCAAAGATGGTTTGGAATGCGCCGTTTGTCTCTCTGAGCTTGTTGAAGGAGAAAAAGCGAGGCTTTTACCCAAATGTAATCATGGGTTTCATGTGGATTGTATAGATATGTGGTTTCAATCCCATTGTACTTGTCCACTTTGCAGGGACCCAGTTGCTTCTGAAACCCCTAAATGCAATAGCACTTCAAGTGTTGGAGAAAATTCCGCAGAGAATATTGGTAGGCAATCACAAGCGGTGGAAAATTTTCAAAACTCAGGTTTAGCTGCTATGAGTGGTTCAGAGTCTCCAAATTTTCCAACTAATGTGTTGGTTTGGGGGAGCCAGACTGAAGTTTGTTCTGTTAATACATCTTCGGAAGAAGAGGGTCCTTCATCTTCTTCTACAACTACAGCTAGCAGTAGCAGTAACAGTAACAGTAACAACAATGGAGACCATGAAATGGTGGTGATTGATATACCAAGTGAGGTCAATTCTTCATCTCTATCTCCTTCTGCAGGCAGGTTTGCTGAAGATGAGCTGAAATCACCAATGACCACAAGATTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTGCTTGTAATCCTGGTCCTGGCTCTATAGATGTTGAACAAGCAGGGAGAGGACGAAGCTAG 960 0.4531 MGDSLVSNDKLGESPAVEVTGKITVLAMIILFMVVVFVLFLHLYAKCFWESIEETTAPPTTRRRRRRRFVFNPGQDPAIYGGQRSGLDPSVLLSLPVVVYQPENFKDGLECAVCLSELVEGEKARLLPKCNHGFHVDCIDMWFQSHCTCPLCRDPVASETPKCNSTSSVGENSAENIGRQSQAVENFQNSGLAAMSGSESPNFPTNVLVWGSQTEVCSVNTSSEEEGPSSSSTTTASSSSNSNSNNNGDHEMVVIDIPSEVNSSSLSPSAGRFAEDELKSPMTTRLRSLKRLLSRDKRLGACNPGPGSIDVEQAGRGRS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00411 319 MobiDBLite consensus disorder prediction 295 319 - -
Accr7g00411 319 CDD RING-H2_EL5-like 110 153 - -
Accr7g00411 319 SMART ring_2 111 152 IPR001841 -
Accr7g00411 319 Pfam Ring finger domain 110 153 IPR001841 -
Accr7g00411 319 MobiDBLite consensus disorder prediction 218 250 - -
Accr7g00411 319 MobiDBLite consensus disorder prediction 218 282 - -
Accr7g00411 319 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 19 256 - -
Accr7g00411 319 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 158 IPR013083 -
Accr7g00411 319 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Accr7g00411 319 FunFam RING-H2 finger protein ATL3 80 158 - -
Accr7g00411 319 SUPERFAMILY RING/U-box 94 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00411 Accr-Chr7 5475234 5476193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00411 1 297 C3H Transcription Factor Family AT1G53820 42.122 3.40e-65 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00411 - - qsa:O6P43_027473 304.293