Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00406 ATGACTGAGGATCGGCGAGTTTTGCCGTGGGTGTTCATCAGCACCTGCATTTTGGGTTGGATGCTCAGTGCTGTCAATGGAAACACAGATCAAACTGATGTTGCTGCTTTAAATGCTATGTTCACCGGTATGAACTCACCATCTGAACTAGGTTGGTCGGCAAATGGTGGTGATCCCTGTGGGGCACAGCTTTGGAAAGGCATTACTTGCTCAGGCAACAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCTGGATCATTCGGTTTCCAGCTTCAAACCATGACATCTGTGACCAACCTAGATATGAGTCACAATAATTTTGCTACCATGCCATACCAACTTCCGCCAAATTTGCAGAGATTAGATCTTTCCAATAACCAATACACTGGGAGTATACCGTATTCAATTTCTGATATGACTTCTCTTACATACCTAAGTTTTGCTCACAATCAACTACAGAATGCGCTGAGTGACGTGTTTCAAAGGCTTTCTAAGCTAGATACACTGGATCTTTCTTTCAATTCTATGTCCGGCAGCCTCCCTCAGGGTTTGAGCTCACTTACAAGCTTGAACAGCCTGTATCTGCAAAACAACCAGTTTACAGGGACTATTGATGTCCTCGCCAATCTTCCTCTTGATACTCTGAATGTGGAAAACAACCATTTTACAGGCTGGATACCAGAACAGCTGAAGGGCATTAACCTCCAGACAGGAGGAAATACATGGAACTCAGGTCCTGCCCCCCCTCCACCTCCTGGGACGCCCCCTGCAACTAGAAGGAACCCGCATCACAAATCTGATGGAAGTAATAGCCCTTCAGATGATGGCACCAGTGATGGGGGGAAAAAATCTGGTATAGGAGGTGGTGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTCGGGGCAGTAGTTGCTTTCTTTTTGGTGAGAAGAAAATCCCGGAAGTCATCTTCAGATATAGAAAAGCATGATAATGAGCCTTTTGCTCCTCTCAGTTCAAACGAAGTTCGCGAAGTGAAGTCAGCACAAACTCCCTCTGTAGTTGACATGAAGATATTTGATACTTCTGCCTCAGTAAATATTAAACCCCCACCCATTGAACGTCATAAATCATTTGATGAAGATGAATTTTCCAAGAAGCCAATTATTGTCAAGAAAACTGTAAAAGCTCCTGCAAATGTGAAATCATATTCTATAGCAGACCTACAGATTGCCACTGGGAGCTTCAGTATGGATAACCTCCTTGGGGAGGGATCTTTTGGACGTGTTTATCGTGCTCACTCTGACGATGGAAAGGTTCTTGCCGTGAAGAAAATTGATTCATCTATCCTTCCCCATGATTCTAGAGATTTTATAGAAATAGTTTCAAACATCTCAAACTTGCACCATCCAAATGTAACGGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAGTGGATCATTACATGACTTACTTCACTTATCAGATGAATATAGCAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCAGCCAACATATTGCTTGATGTGGATCTCAATCCTCATCTCTCGGACTCAGGATTGGCAAGCTATATTCCAAATGCTGACCAGGTCTTGAACCGAAATGCCGGATCTGGGTATGATGCTCCTGAAGTTGCCTTATCTGGTCAATATACTTTGAAGAGTGATGTTTACAGCTTTGGAATTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAAACCAAGATCAGAGCAATCTCTGGTACGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAGATGGTTGATCCTGCTCTGGAGGGGCTATACCCCGTTAAGTCCCTTTCTAGGTTTGCTGATGTCATTGCTCTCTGTGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCGGAGGTAGTTCAAGCATTGGTTCGATTAGTGCAGCGAGCTAACATGAGCAAGAGGACATTTGGAACAGATCAAGGAGGATCCAATCGAGGCGGTGATGATCAAGACAACACACAGGATATGTTGTAA 2157 0.4349 MTEDRRVLPWVFISTCILGWMLSAVNGNTDQTDVAALNAMFTGMNSPSELGWSANGGDPCGAQLWKGITCSGNRVTEIKLPNLGLSGSFGFQLQTMTSVTNLDMSHNNFATMPYQLPPNLQRLDLSNNQYTGSIPYSISDMTSLTYLSFAHNQLQNALSDVFQRLSKLDTLDLSFNSMSGSLPQGLSSLTSLNSLYLQNNQFTGTIDVLANLPLDTLNVENNHFTGWIPEQLKGINLQTGGNTWNSGPAPPPPPGTPPATRRNPHHKSDGSNSPSDDGTSDGGKKSGIGGGGIAGIVISILLVGAVVAFFLVRRKSRKSSSDIEKHDNEPFAPLSSNEVREVKSAQTPSVVDMKIFDTSASVNIKPPPIERHKSFDEDEFSKKPIIVKKTVKAPANVKSYSIADLQIATGSFSMDNLLGEGSFGRVYRAHSDDGKVLAVKKIDSSILPHDSRDFIEIVSNISNLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDLLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDVDLNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGIVMLELLSGRKPFDSSKPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGTDQGGSNRGGDDQDNTQDML 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00406 718 Gene3D Phosphorylase Kinase; domain 1 375 488 - -
Accr7g00406 718 Gene3D Transferase(Phosphotransferase) domain 1 490 704 - -
Accr7g00406 718 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Accr7g00406 718 Gene3D Ribonuclease Inhibitor 140 246 IPR032675 -
Accr7g00406 718 SMART LRR_typ_2 141 164 IPR003591 -
Accr7g00406 718 SMART LRR_typ_2 189 219 IPR003591 -
Accr7g00406 718 SMART LRR_typ_2 165 188 IPR003591 -
Accr7g00406 718 SMART LRR_typ_2 96 119 IPR003591 -
Accr7g00406 718 Pfam Leucine rich repeat 151 202 IPR001611 GO:0005515
Accr7g00406 718 MobiDBLite consensus disorder prediction 318 340 - -
Accr7g00406 718 SUPERFAMILY Protein kinase-like (PK-like) 396 683 IPR011009 -
Accr7g00406 718 MobiDBLite consensus disorder prediction 238 286 - -
Accr7g00406 718 MobiDBLite consensus disorder prediction 246 260 - -
Accr7g00406 718 Pfam Leucine rich repeat N-terminal domain 31 71 IPR013210 -
Accr7g00406 718 Pfam Protein tyrosine and serine/threonine kinase 414 683 IPR001245 GO:0004672|GO:0006468
Accr7g00406 718 ProSiteProfiles Protein kinase domain profile. 412 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00406 718 PANTHER LEUCINE RICH REPEAT KINASE 2 73 690 - -
Accr7g00406 718 MobiDBLite consensus disorder prediction 694 718 - -
Accr7g00406 718 Gene3D Ribonuclease Inhibitor 32 139 IPR032675 -
Accr7g00406 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Accr7g00406 718 SUPERFAMILY L domain-like 30 232 - -
Accr7g00406 718 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 376 488 - -
Accr7g00406 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 489 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00406 Accr-Chr7 5422736 5429474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00406 11 718 Strubbelig Receptor Gene Family AT1G53730 66.203 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Accr7g00406 PK_Tyr_Ser-Thr 5.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00406 - - gmx:100807707 1022.31