Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00399 ATGTCTGCTTTCTCTCCTTCGTCTTCATCGTCTTCTTCTTCTTGTTCTTCATTTTACATGAAGAAAGATCAACAAGACGACATCTTTCCCTTCTGGGTATCTGTTCTGATGACCCTAGAAGCTTCAAAGCAAAGACAGAGACCAAACCCATCAACATCAGCTTCTGCAACTAGACCCTCCTCCACCATTATTCTCAGGGATACTACGACGTTCATGGCCTTTCTCATGGTACCTTTAGTTCTTCTGTCTTGCCTTGTTGTCACTGTCTCCTCTTCTTGTACCCAATTGGATAAAGATTCTCTCTTGGACTTCTGCAACAATATATCCACAGAACCTCACTCTCCTCTTAATTGGTCTTCTTCGGTTGATTGCTGCTCTTGGGAAGGCGTTCTTTGCGATGAGAGCAATATGGGTAATGGGGATCAGAGAGTTATTGGCTTATTGCTTCCATCCAGAGGTCTCACTGGTTCCATATCCCCTGCTCTCACGAACCTCGCTGGTCTGTCTCAGCTCAATCTCTCTCATAATCGACTTTCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTTAGTCACCTGCAGAGTATTGATTTAAGCTACAATCGTCTCTCCGATGAGTTGCCAGCATCTGATGTGAATAATAATAACAAAACCAGTAGTATTATCCAGAAGCTTGATTTGTCCAGCAATCTGTTTCAAGGAACACTCCCTTCTTCTTTCCTTCATTACCTTGGAGCTGCTGCAGCAGCAGGGACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAACTTTGCATTAATGACAGTCTCATATTCTTGGATCTTTCCTACAATAAATTCAACGGTTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATTTTCTCTCCGGGCCTCTTCCTAGTGATCTTTTTGGTGCTGTTTCCCTCAGAGAGATCTCCTTGCCCGTCAATCAACTCTCTGGAAATGTTGATGATGGCATTGCTAGACTTACCAATCTCACAGTCCTGGCGCTCTACTCCAATAATTTCAGGGGACTCATACCACGAGTTATTGGGAAGCTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTCGTGAACTGTGTCAATCTAGTTGAGTTGAATTTGAGGGTCAACTTCTTGAAGGGGAATCTTGTAGATTTTAATTTCTCCGGATTCCAGCGGCTTACTACTCTTGATCTTGGCAACAATAATTTTACGGGCACTTTACCAATAACCCTTTATGCATGCAAATCACTAGCTGCGGTAAGACTGGCATCTAATGATCTCGTGGGACAGATCACACCAGATATACTTAGACTTGAGTCTCTCTCTTTCCTATCAATATCTACCAACTACCTAAGAAATTTCACTGGAGCTATGAAGATACTTGCGGGACTCAATAACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACCTTGCCGTATGATGTGAGTTTAGTAGGCCCAGGCGGATTTCCGAAACTCCAAGTTCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCACGCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTATAATCTCATGACCGGTTCAATTCCTCCTTGGTTGGGTAACCTTCCACAGCTATTCTACGTAGACTTGTCTCATAACCAACTTACAGGAGTATTTCCCGCGGAAGCCACAGGATTTCCAGCATTAACATCACAACAGACAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGCAAAATGCTTCTCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCAGCGATATATCTGGGATACAATGGTCTCAGTGGCAATATTCCTAAGGAGATTGGCCTAATGAAAGTTCTACATCAGCTGGACCTGGGTAGTAACAACTTCTCTGGCAGTATTCCTGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCAACTGTCTGGTGAAATTCCTTCTTCACTCAAAAGCCTCCATTTCTTGTCATTTTTTACTGTGGCAAACAATGATCTTCAAGGAGAGATACCAACGGGTGGCCAATTTGATACTTTCCCTCCTTCCAGCTTTTCAGGAAACCCGCAATTGTGTGGTTCAGTTATACAACGTTCTTGTCCTAGTCCACAAGGTGACAACAGCACCATTCATCGCACTTCGAAGAAAAAAATCATGATTGGACTTGTTATCGCAGTCTGTTTGGGAACTGTTGCTATCATGAGTGTGTTGGTAATCTGGATACTTTCCAAGAGGAGGATCAATCCAGGGGGAGACCCAGACAAGATTGAACTGGATACAATTTCTGCCCACTCCAATAGCGGTGTTCATCCTGAAGTTGATAAGGAGGCTAGTTTAGTGGTGATGTTCCCCAGTAAAACAAATGAAATCAAAGATCTCAACATATTTGAGATCTTAAAAGCCACTGAAAATTTCAGTCAAGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACGTTACCTGATGGAACTAAGCTAGCTATCAAGAAACTTTCAGGAGATTTGGGGCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGTTTTGTCAACAGCCCGGCATGAGAATCTGGTTGCATTGCAAGGCTACTGTGTACATAATGGCTTTCGGCTTCTGATATATTCTTTCATGGAAAATGGAAGTCTGGATTACTGGTTGCATGAGAAGCCAGATGGTGCAACTCAACTTGATTGGCCAACCCGACTGAAGATTGCACAGGGTGCGAGTTGTGGGTTGGCTTACATGCATCAGATATGTGAACCACACATTGTCCATCGTGATATAAAATCAAGCAACATCCTCCTTAATGAGAAGTTTGAGGCACATGTTGCTGATTTCGGGTTGTCTCGGTTGATTCTTCCATATCACACTCATGTTACCACTGAACTTGTAGGTACACTAGGTTACATTCCCCCAGAGTATGGACAAGCATGGGTTGCCACTCTCAGGGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTCACTGGGAGGAGACCTGTTGACATATGCAAGCCAAAAATGTCAAGGGAATTGGTTGGCTGGGTGCAACAAATGAGGAGTGAAGGAAAACAAGACGAAGTTTTCGACCCTCTTCTGAGAGGAAAGGGCTTTGAAGAAGAGATGCTGCAGGTACTTGATGTGGCCTGCATGTGTGTCAACCTCAATCCTTTCAAGAGACCAAGCATTAGAGAAGTTGTTGATTGGTTGAAGAATGTAGGATCAGCCAAACAACAGAATAAAGAGTAG 3417 0.4305 MSAFSPSSSSSSSSCSSFYMKKDQQDDIFPFWVSVLMTLEASKQRQRPNPSTSASATRPSSTIILRDTTTFMAFLMVPLVLLSCLVVTVSSSCTQLDKDSLLDFCNNISTEPHSPLNWSSSVDCCSWEGVLCDESNMGNGDQRVIGLLLPSRGLTGSISPALTNLAGLSQLNLSHNRLSGNLPTQFFSLLSHLQSIDLSYNRLSDELPASDVNNNNKTSSIIQKLDLSSNLFQGTLPSSFLHYLGAAAAAGTLTSFNVSNNSFIGPIPTSQLCINDSLIFLDLSYNKFNGSIQSGLGACSKLEIFRAGFNFLSGPLPSDLFGAVSLREISLPVNQLSGNVDDGIARLTNLTVLALYSNNFRGLIPRVIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNFLKGNLVDFNFSGFQRLTTLDLGNNNFTGTLPITLYACKSLAAVRLASNDLVGQITPDILRLESLSFLSISTNYLRNFTGAMKILAGLNNLSSLVLSKNFYNETLPYDVSLVGPGGFPKLQVLALGGCNFTGQIPRWLARLRMLEVIDLSYNLMTGSIPPWLGNLPQLFYVDLSHNQLTGVFPAEATGFPALTSQQTNDRIVRSYLELPVFIVPQNASQQQYNQLSNLPPAIYLGYNGLSGNIPKEIGLMKVLHQLDLGSNNFSGSIPVQISNLTNLEKLDLSGNQLSGEIPSSLKSLHFLSFFTVANNDLQGEIPTGGQFDTFPPSSFSGNPQLCGSVIQRSCPSPQGDNSTIHRTSKKKIMIGLVIAVCLGTVAIMSVLVIWILSKRRINPGGDPDKIELDTISAHSNSGVHPEVDKEASLVVMFPSKTNEIKDLNIFEILKATENFSQANIIGCGGFGLVYKATLPDGTKLAIKKLSGDLGLMEREFKAEVEVLSTARHENLVALQGYCVHNGFRLLIYSFMENGSLDYWLHEKPDGATQLDWPTRLKIAQGASCGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDICKPKMSRELVGWVQQMRSEGKQDEVFDPLLRGKGFEEEMLQVLDVACMCVNLNPFKRPSIREVVDWLKNVGSAKQQNKE 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00399 1138 Gene3D Ribonuclease Inhibitor 218 414 IPR032675 -
Accr7g00399 1138 Gene3D Phosphorylase Kinase; domain 1 817 930 - -
Accr7g00399 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 977 989 IPR008271 GO:0004672|GO:0006468
Accr7g00399 1138 Gene3D Ribonuclease Inhibitor 96 217 IPR032675 -
Accr7g00399 1138 SMART serkin_6 855 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00399 1138 SUPERFAMILY L domain-like 92 339 - -
Accr7g00399 1138 SUPERFAMILY L domain-like 252 600 - -
Accr7g00399 1138 FunFam Leucine-rich repeat receptor protein kinase MSP1 820 930 - -
Accr7g00399 1138 SUPERFAMILY L domain-like 627 742 - -
Accr7g00399 1138 Pfam Leucine Rich repeat 191 206 IPR001611 GO:0005515
Accr7g00399 1138 ProSitePatterns Protein kinases ATP-binding region signature. 861 884 IPR017441 GO:0005524
Accr7g00399 1138 Pfam Leucine rich repeat 524 584 IPR001611 GO:0005515
Accr7g00399 1138 ProSiteProfiles Leucine-rich repeat profile. 682 704 IPR001611 GO:0005515
Accr7g00399 1138 Gene3D Transferase(Phosphotransferase) domain 1 931 1138 - -
Accr7g00399 1138 Pfam Protein kinase domain 856 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00399 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 135 321 - -
Accr7g00399 1138 CDD STKc_IRAK 861 1128 - -
Accr7g00399 1138 Gene3D Ribonuclease Inhibitor 415 758 IPR032675 -
Accr7g00399 1138 PRINTS Leucine-rich repeat signature 574 587 - -
Accr7g00399 1138 PRINTS Leucine-rich repeat signature 680 693 - -
Accr7g00399 1138 FunFam Leucine-rich repeat receptor-like kinase 97 221 - -
Accr7g00399 1138 Pfam Leucine rich repeat N-terminal domain 97 133 IPR013210 -
Accr7g00399 1138 ProSiteProfiles Protein kinase domain profile. 855 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00399 1138 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 317 412 - -
Accr7g00399 1138 Pfam Leucine Rich Repeat 682 704 IPR001611 GO:0005515
Accr7g00399 1138 FunFam Tyrosine-sulfated glycopeptide receptor 1 417 755 - -
Accr7g00399 1138 SUPERFAMILY Protein kinase-like (PK-like) 840 1126 IPR011009 -
Accr7g00399 1138 FunFam Leucine-rich repeat receptor-like protein kinase 931 1137 - -
Accr7g00399 1138 SMART LRR_typ_2 165 189 IPR003591 -
Accr7g00399 1138 SMART LRR_typ_2 347 370 IPR003591 -
Accr7g00399 1138 SMART LRR_typ_2 547 571 IPR003591 -
Accr7g00399 1138 SMART LRR_typ_2 680 704 IPR003591 -
Accr7g00399 1138 SMART LRR_typ_2 371 395 IPR003591 -
Accr7g00399 1138 SMART LRR_typ_2 190 214 IPR003591 -
Accr7g00399 1138 SMART LRR_typ_2 420 444 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00399 Accr-Chr7 5304098 5307514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00399 51 786 Miscellaneous Gene Families AT1G17240 49.258 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr7g00399 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00399 - - pcin:129290895 1867.43