Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00398 ATGCCAACCCCATCAAAATCATCAAGAAGAAGATCCTATGCCTCTCCTTCATCTTCCATAATTATGGTTATGAGTTTAATGGCCTTTTTCACAGTACCATTAGTTCTGTCTTGTCTAGTCATCACAGTCTCCTCCTCTTGTACCCAATTGGATAAAGATTCTCTCTTGGACTTCTACAACAATATATCCACAGAACCTCACTCTCCTCTTAATTGGTCTTCTTCGGTTGATTGCTGCTCTTGGGAAGGCGTTCTTTGCGTTGAGAGCAATATGGGTAATGGGGATCAGAGAGTTATTGGCTTATTGCTTCCATCCAGAGGTCTCACTGGTTCCATATCCCCTGCTCTCACGAACCTCGCTGGTCTGTCTCAGCTCAATCTCTCTCATAATCGACTTTCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTTAGTCACCTGCAGAGTATTGATTTAAGCTACAATCGTCTCTCTGATGAGTTGCCAGCATCTGTTGTGAATAATAATGACAAAACCAGTAGTATTATCCAGGAGGTTGATTTGTCCAGCAATCTGTTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGGAGCTGCTGCAGCAGCAGGGACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAACTTTGCATTAATGACAGTCTCATATCCTTGGATCTTTCCTACAATAAATTCAACGGTTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATTTTCTCTCCGGGCCTCTTCCTAGTGACCTTTTTGGTGCTGTTTCCCTCAGAGAGATCTCCTTGCCCCTCAATCAACTCTCTGGAAATGTTGATGATGGCATTGCTAGACTTACCAATCTCACAGTCCTGGCGCTCTACTCCAATAAGTTCAGGGGACTCATACCACGAGATATTGGGAAACTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTCGTGAACTGTGTCAATCTAGTTGAGTTGAATTTGAGGGTCAACTTCTTGAAGGGGAATCTTGTAGATTTTAATTTCTCCGGATTCCAGCGGCTTACTACTCTTGATCTTGGCAACAATAATTTTACGGGCACTTTACCAATAACCCTTTATGCATGCAAATCACTAGCTGCGGTAAGACTGGCATCTAATGATCTGGAGGGACAGATCACACCAGATATAATTGGACTTGAGTCTCTGTCTTTCCTATCAATATCCACCAACTACCTCAGAAATTTCACTGGAGCTATGAAGATACTTGCGGGACTCAAGAACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACTATGCCGTATGATGAGCGCTTAGTAGGCCCAGGCGGATTTCAAAAACTCCAAGTTCTATCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCACGCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTTTAATCTCATGACCGGTTCAATTCCTCCTTGGTTGGGTACACTTCCACAGCTATTCTACGTAGACTTGTCTCATAACCAACTTACAGGAGTATTTCCCGCGGAACCCATAGGATTTCCAGCATTAACATCACAACAGACAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGCAAAATGCTTATCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCTGCGATATATCTGGGAAACAATGGTCTCAGTGGCAATATTCCTAAGGAGATTGGCCTAATGAAAGTTCTACATCAGCTGGACCTAGGTGGTAATAACTTCTCTGGCGGTATTCCTGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCAACTGTCTGGTGAAATTCCTTCTTCACTCGAAAGCCTCCATTTCTTGTCATTTTTTACTGTGGCAGACAATGATCTTCAAGGAGAGATACCAAGGGGTGGCCAATTTGATACTCTCCCTCCTTCCAGCTTTTCAGGAAACCCAAAATTATGTGGCTCAGCAATTCAACGCTCTTGTTATAGTCCTCCAAGCGATAGCACAACCTTGAACAAAAAGACAACCCGGAACAAAAGTAAAATAATTGGACTTTCCCTTGCAGTTAGCTTTGCCGTCGTTTGTATCATCATTGTTTACACGGTCCGGACACTTTTCAAGAGGAGGATCAACCCAAGAGGAGATCCTGATGAGATTGAACAAGAATCAACTTTTGCAGACTATAACAATGGTTTTTATCCTGAAGTAGATAAGAAGGCTGGCCAAGTGGTATTGTTCCCCAATAAAGCAAATGAAATCAAAGATCTTACTATGTCTGAGATCTTGAAAGCCACAGAAAATTTTAGTCTAGCAAACATTATAGGATCTGAGGATTGTGGTTTTGTTTATAGAGCGACCTTACCCGATGGAAATAAACTAGCCATAAAGAAACTTGCAGGAGAATCAGCGCTTACGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCGACACAAGAATCTGGTTGCGTTGCTAGGCTATTGTGTGCATGATAGCTTTCGACTTCTCATATATAGTTATATAGAAAATGGAAGTCTAGATTATTGGTTGCATGAGAAGGCTGGCACTGCGTTTCAACTTGATTGGCCAACTCGACTGAAGATAGCACGGGGCGTGACTTGTACATTAGGTTATATTCCGCCTGAGTATGGACAAGCATCTGAGGCCACTCTTCGGGGAGATGTGTACAGCTTTGGCATTCTCATGCTTGAGTTGATCACTGGGAGGAGGCCTCTTGACATGTGCAAGACAAAAATGCCAATGGAACAGGTTCTTTGGATGCAACAAATGAGGAGTGAAGGAAAACAGGATCAAGTCTTCGACCCACTTTTAAGAGGAAAGGGCTTTGAAGAGGAGATGCGGCAGGTACTTGATGTGGCTTTCACGTGTGTCAGCCAAAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGATTGGCTGAAGAATGTAGGATCAGCCAAACAACACCAGAATGAAGACTAG 3123 0.4268 MPTPSKSSRRRSYASPSSSIIMVMSLMAFFTVPLVLSCLVITVSSSCTQLDKDSLLDFYNNISTEPHSPLNWSSSVDCCSWEGVLCVESNMGNGDQRVIGLLLPSRGLTGSISPALTNLAGLSQLNLSHNRLSGNLPTQFFSLLSHLQSIDLSYNRLSDELPASVVNNNDKTSSIIQEVDLSSNLFQGTLPSSFLQYLGAAAAAGTLTSFNVSNNSFIGPIPTSQLCINDSLISLDLSYNKFNGSIQSGLGACSKLEIFRAGFNFLSGPLPSDLFGAVSLREISLPLNQLSGNVDDGIARLTNLTVLALYSNKFRGLIPRDIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNFLKGNLVDFNFSGFQRLTTLDLGNNNFTGTLPITLYACKSLAAVRLASNDLEGQITPDIIGLESLSFLSISTNYLRNFTGAMKILAGLKNLSSLVLSKNFYNETMPYDERLVGPGGFQKLQVLSLGGCNFTGQIPRWLARLRMLEVIDLSFNLMTGSIPPWLGTLPQLFYVDLSHNQLTGVFPAEPIGFPALTSQQTNDRIVRSYLELPVFIVPQNAYQQQYNQLSNLPPAIYLGNNGLSGNIPKEIGLMKVLHQLDLGGNNFSGGIPVQISNLTNLEKLDLSGNQLSGEIPSSLESLHFLSFFTVADNDLQGEIPRGGQFDTLPPSSFSGNPKLCGSAIQRSCYSPPSDSTTLNKKTTRNKSKIIGLSLAVSFAVVCIIIVYTVRTLFKRRINPRGDPDEIEQESTFADYNNGFYPEVDKKAGQVVLFPNKANEIKDLTMSEILKATENFSLANIIGSEDCGFVYRATLPDGNKLAIKKLAGESALTEREFKAEVEALSTARHKNLVALLGYCVHDSFRLLIYSYIENGSLDYWLHEKAGTAFQLDWPTRLKIARGVTCTLGYIPPEYGQASEATLRGDVYSFGILMLELITGRRPLDMCKTKMPMEQVLWMQQMRSEGKQDQVFDPLLRGKGFEEEMRQVLDVAFTCVSQNPFKRPSIREVVDWLKNVGSAKQHQNED 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00398 1040 SUPERFAMILY L domain-like 72 320 - -
Accr7g00398 1040 Gene3D Ribonuclease Inhibitor 275 369 IPR032675 -
Accr7g00398 1040 ProSiteProfiles Protein kinase domain profile. 811 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00398 1040 FunFam Leucine-rich repeat receptor-like kinase 51 175 - -
Accr7g00398 1040 SMART LRR_typ_2 301 324 IPR003591 -
Accr7g00398 1040 SMART LRR_typ_2 144 168 IPR003591 -
Accr7g00398 1040 SMART LRR_typ_2 634 658 IPR003591 -
Accr7g00398 1040 SMART LRR_typ_2 501 525 IPR003591 -
Accr7g00398 1040 SMART LRR_typ_2 119 143 IPR003591 -
Accr7g00398 1040 SMART LRR_typ_2 325 349 IPR003591 -
Accr7g00398 1040 SMART LRR_typ_2 374 398 IPR003591 -
Accr7g00398 1040 Pfam Leucine Rich repeat 145 160 IPR001611 GO:0005515
Accr7g00398 1040 Pfam Leucine Rich Repeat 636 658 IPR001611 GO:0005515
Accr7g00398 1040 Pfam Protein tyrosine and serine/threonine kinase 813 924 IPR001245 GO:0004672|GO:0006468
Accr7g00398 1040 Gene3D Ribonuclease Inhibitor 200 274 IPR032675 -
Accr7g00398 1040 FunFam Tyrosine-sulfated glycopeptide receptor 1 371 709 - -
Accr7g00398 1040 Gene3D Ribonuclease Inhibitor 370 711 IPR032675 -
Accr7g00398 1040 Pfam Leucine rich repeat 479 538 IPR001611 GO:0005515
Accr7g00398 1040 PRINTS Leucine-rich repeat signature 634 647 - -
Accr7g00398 1040 PRINTS Leucine-rich repeat signature 528 541 - -
Accr7g00398 1040 ProSiteProfiles Leucine-rich repeat profile. 636 659 IPR001611 GO:0005515
Accr7g00398 1040 Gene3D Phosphorylase Kinase; domain 1 777 886 - -
Accr7g00398 1040 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 264 435 - -
Accr7g00398 1040 SUPERFAMILY Protein kinase-like (PK-like) 795 1030 IPR011009 -
Accr7g00398 1040 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 366 - -
Accr7g00398 1040 FunFam Leucine-rich repeat receptor protein kinase MSP1 779 886 - -
Accr7g00398 1040 SUPERFAMILY L domain-like 235 693 - -
Accr7g00398 1040 Gene3D Ribonuclease Inhibitor 48 199 IPR032675 -
Accr7g00398 1040 Gene3D Transferase(Phosphotransferase) domain 1 917 1040 - -
Accr7g00398 1040 Pfam Leucine rich repeat N-terminal domain 51 86 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00398 Accr-Chr7 5270632 5273919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00398 29 742 Miscellaneous Gene Families AT1G17240 49.093 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr7g00398 PK_Tyr_Ser-Thr 3.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00398 - - pcin:129290895 1371.68