Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00397 ATGCCAACCCCATCAAAATCATCAAGAAGAAGATCCTATGCCTCTCCTTCATCTTCCATAATTATGGTTATGAGTTTAATGGCCTTTTTCACAGTACCATTAGTTCTGTCTTGTCTAGTCATCACAGTCTCCTCCTCTTGTACCCAATTGGATAAAGATTCTCTCTTGGACTTCTACAACAATATATCCACAGAACCTCACTCTCCTCTTAATTGGTCTTCTTCGGTTGATTGCTGCTCTTGGGAAGGCGTTCTTTGCGTTGAGAGCAATATGGGTAATGGGGATCAGAGAGTTATTGGCTTATTGCTTCCATCCAGAGGTCTCACTGGTTCCATATCCCCTGCTCTCACGAACCTCGCTGGTCTGTCTCAGCTCAATCTCTCTCATAATCGACTTTCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTTAGTCACCTGCAGAGTATTGATTTAAGCTACAATCGTCTCTCTGATGAGTTGCCAGCATCTGTTGTGAATAATAATGACAAAACCAGTAGTATTATCCAGGAGGTTGATTTGTCCAGCAATCTGTTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGGAGCTGCTGCAGCAGCAGGGACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAACTTTGCATTAATGACAGTCTCATATCCTTGGATCTTTCCTACAATAAATTCAACGGTTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATTTTCTCTCCGGGCCTCTTCCTAGTGACCTTTTTGGTGCTGTTTCCCTCAGAGAGATCTCCTTGCCCCTCAATCAACTCTCTGGAAATGTTGATGATGGCATTGCTAGACTTACCAATCTCACAGTCCTGGCGCTCTACTCCAATAAGTTCAGGGGACTCATACCACGAGATATTGGGAAACTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTCGTGAACTGTGTCAATCTAGTTGAGTTGAATTTGAGGGTCAACTTCTTGAAGGGGAATCTTGTAGATTTTAATTTCTCCGGATTCCAGCGGCTTACTACTCTTGATCTTGGCAACAATAATTTTACGGGCACTTTACCAATAACCCTTTATGCATGCAAATCACTAGCTGCGGTAAGACTGGCATCTAATGATCTGGAGGGACAGATCACACCAGATATAATTGGACTTGAGTCTCTGTCTTTCCTATCAATATCCACCAACTACCTCAGAAATTTCACTGGAGCTATGAAGATACTTGCGGGACTCAAGAACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACTATGCCGTATGATGAGCGCTTAGTAGGCCCAGGCGGATTTCAAAAACTCCAAGTTCTATCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCACGCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTTTAATCTCATGACCGGTTCAATTCCTCCTTGGTTGGGTACACTTCCACAGCTATTCTACGTAGACTTGTCTCATAACCAACTTACAGGAGTATTTCCCGCGGAACCCATAGGATTTCCAGCATTAACATCACAACAGACAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGCAAAATGCTTATCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCTGCGATATATCTGGGAAACAATGGTCTCAGTGGCAATATTCCTAAGGAGATTGGCCTAATGAAAGTTCTACATCAGCTGGACCTAGGTGGTAATAACTTCTCTGGCGGTATTCCTGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCAACTGTCTGGTGAAATTCCTTCTTCACTCGAAAGCCTCCATTTCTTGTCATTTTTTACTGTGGCAGACAATGATCTTCAAGGAGAGATACCAAGGGGTGGCCAATTTGATACTCTCCCTCCTTCCAGCTTTTCAGGAAACCCAAAATTATGTGGCTCAGCAATTCAACGCTCTTGTTATAGTCCTCCAAGCGATAGCACAACCTTGAACAAAAAGACAACCCGGAACAAAAGTAAAATAATTGGACTTTCCCTTGCAGTTAGCTTTGCCGTCGTTTGTATCATCATTGTTTACACGGTCCGGACACTTTTCAAGAGGAGGATCAACCCAAGAGGAGATCCTGATGAGATTGAACAAGAATCAACTTTTGCAGACTATAACAATGGTTTTTATCCTGAAGTAGATAAGAAGGCTGGCCAAGTGGTATTGTTCCCCAATAAAGCAAATGAAATCAAAGATCTTACTATGTCTGAGATCTTGAAAGCCACAGAAAATTTTAGTCTAGCAAACATTATAGGATCTGAGGATTGTGGTTTTGTTTATAGAGCGACCTTACCCGATGGAAATAAACTAGCCATAAAGAAACTTGCAGGAGAATCAGCGCTTACGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCGACACAAGAATCTGGTTGCGTTGCTAGGCTATTGTGTGCATGATAGCTTTCGACTTCTCATATATAGTTATATAGAAAATGGAAGTCTAGATTATTGGTTGCATGAGAAGGCTGGCACTGCGTTTCAACTTGATTGGCCAACTCGACTGAAGATAGCACGGGGCGTGACTTGTGGGTTGGCTTACATGCATCACACATGTGTACCACATATTGTACATCGCAATATAAAGTCAAGCAATATCCTCCTAGACGAAAATTTTGATGCGCTCATTGCAGATTTTGGGTTATCCCGATTGATTCCCCCTTATCAAAATCATGTTACAACTGAATTTGTAGGTACATTAGGTTATATTCCGCCTGAGTATGGACAAGCATCTGAGGCCACTCTTCGGGGAGATGTGTACAGCTTTGGCATTCTCATGCTTGAGTTGATCACTGGGAGGAGGCCTCTTGACATGTGCAAGACAAAAATGCCAATGGAACAGGTTCTTTGGATGCAACAAATGAGGAGTGAAGGAAAACAGGATCAAGTCTTCGACCCACTTTTAAGAGGAAAGGGCTTTGAAGAGGAGATGCGGCAGGTACTTGATGTGGCTTTCACGTGTGTCAGCCAAAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGATTGGCTGAAGAATGTAGGATCAGCCAAACAACACCAGAATGAAGACTAG 3288 0.4249 MPTPSKSSRRRSYASPSSSIIMVMSLMAFFTVPLVLSCLVITVSSSCTQLDKDSLLDFYNNISTEPHSPLNWSSSVDCCSWEGVLCVESNMGNGDQRVIGLLLPSRGLTGSISPALTNLAGLSQLNLSHNRLSGNLPTQFFSLLSHLQSIDLSYNRLSDELPASVVNNNDKTSSIIQEVDLSSNLFQGTLPSSFLQYLGAAAAAGTLTSFNVSNNSFIGPIPTSQLCINDSLISLDLSYNKFNGSIQSGLGACSKLEIFRAGFNFLSGPLPSDLFGAVSLREISLPLNQLSGNVDDGIARLTNLTVLALYSNKFRGLIPRDIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNFLKGNLVDFNFSGFQRLTTLDLGNNNFTGTLPITLYACKSLAAVRLASNDLEGQITPDIIGLESLSFLSISTNYLRNFTGAMKILAGLKNLSSLVLSKNFYNETMPYDERLVGPGGFQKLQVLSLGGCNFTGQIPRWLARLRMLEVIDLSFNLMTGSIPPWLGTLPQLFYVDLSHNQLTGVFPAEPIGFPALTSQQTNDRIVRSYLELPVFIVPQNAYQQQYNQLSNLPPAIYLGNNGLSGNIPKEIGLMKVLHQLDLGGNNFSGGIPVQISNLTNLEKLDLSGNQLSGEIPSSLESLHFLSFFTVADNDLQGEIPRGGQFDTLPPSSFSGNPKLCGSAIQRSCYSPPSDSTTLNKKTTRNKSKIIGLSLAVSFAVVCIIIVYTVRTLFKRRINPRGDPDEIEQESTFADYNNGFYPEVDKKAGQVVLFPNKANEIKDLTMSEILKATENFSLANIIGSEDCGFVYRATLPDGNKLAIKKLAGESALTEREFKAEVEALSTARHKNLVALLGYCVHDSFRLLIYSYIENGSLDYWLHEKAGTAFQLDWPTRLKIARGVTCGLAYMHHTCVPHIVHRNIKSSNILLDENFDALIADFGLSRLIPPYQNHVTTEFVGTLGYIPPEYGQASEATLRGDVYSFGILMLELITGRRPLDMCKTKMPMEQVLWMQQMRSEGKQDQVFDPLLRGKGFEEEMRQVLDVAFTCVSQNPFKRPSIREVVDWLKNVGSAKQHQNED 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00397 1095 Gene3D Ribonuclease Inhibitor 369 711 IPR032675 -
Accr7g00397 1095 Gene3D Ribonuclease Inhibitor 199 274 IPR032675 -
Accr7g00397 1095 Gene3D Phosphorylase Kinase; domain 1 777 886 - -
Accr7g00397 1095 FunFam Leucine-rich repeat receptor-like kinase 51 174 - -
Accr7g00397 1095 ProSiteProfiles Protein kinase domain profile. 811 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00397 1095 SMART LRR_typ_2 301 324 IPR003591 -
Accr7g00397 1095 SMART LRR_typ_2 144 168 IPR003591 -
Accr7g00397 1095 SMART LRR_typ_2 634 658 IPR003591 -
Accr7g00397 1095 SMART LRR_typ_2 501 525 IPR003591 -
Accr7g00397 1095 SMART LRR_typ_2 119 143 IPR003591 -
Accr7g00397 1095 SMART LRR_typ_2 325 349 IPR003591 -
Accr7g00397 1095 SMART LRR_typ_2 374 398 IPR003591 -
Accr7g00397 1095 FunFam Tyrosine-sulfated glycopeptide receptor 1 371 709 - -
Accr7g00397 1095 Pfam Leucine rich repeat N-terminal domain 51 86 IPR013210 -
Accr7g00397 1095 Pfam Leucine Rich Repeat 636 658 IPR001611 GO:0005515
Accr7g00397 1095 Gene3D Ribonuclease Inhibitor 275 368 IPR032675 -
Accr7g00397 1095 PRINTS Leucine-rich repeat signature 634 647 - -
Accr7g00397 1095 PRINTS Leucine-rich repeat signature 528 541 - -
Accr7g00397 1095 FunFam Leucine-rich repeat receptor protein kinase MSP1 779 886 - -
Accr7g00397 1095 Pfam Leucine rich repeat 479 538 IPR001611 GO:0005515
Accr7g00397 1095 SUPERFAMILY L domain-like 235 693 - -
Accr7g00397 1095 Gene3D Transferase(Phosphotransferase) domain 1 887 1095 - -
Accr7g00397 1095 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 271 366 - -
Accr7g00397 1095 Pfam Leucine Rich repeat 145 160 IPR001611 GO:0005515
Accr7g00397 1095 ProSiteProfiles Leucine-rich repeat profile. 636 659 IPR001611 GO:0005515
Accr7g00397 1095 SUPERFAMILY L domain-like 72 318 - -
Accr7g00397 1095 SUPERFAMILY Protein kinase-like (PK-like) 794 1082 IPR011009 -
Accr7g00397 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 264 436 - -
Accr7g00397 1095 Pfam Protein kinase domain 814 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00397 1095 FunFam Leucine-rich repeat receptor-like protein kinase 887 1093 - -
Accr7g00397 1095 Gene3D Ribonuclease Inhibitor 48 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00397 Accr-Chr7 5270632 5273919 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00397 29 742 Miscellaneous Gene Families AT1G17240 49.093 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Accr7g00397 Pkinase 7.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00397 - - pcin:129290895 1650.57