Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00389 ATGGAATTGCTGATGCAAGATGTCAAAATGCATTCTGATGATAAGGAAGAAGACGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGACGAAGCAGAGATTGTTAGAGAGGAAAGCAGCAGCAACAATGCTGCTACCACCACCATCGAATCTCACAATTCATCACCTCGATTAGGGTTACCATCAGCACCGGCCACCAATTTCACCGCCAATCACAGAAAACCGGACCTCATGGACTTGTCGCTCGGAGGAATTCGTATCGGAAAAGATGGTGAAGAACAAGAAGAAGGTAATTTCCAAGGAGGAGGTAGCGGCGGCGGTGGTGACGATGTTGGTGGTGCTGCTATTGAGAAAGAGCACATGTTCGATAAAGTGGTGACTCCGAGTGACGTAGGCAAGCTCAACCGCCTCGTGATACCAAAGCAATACGCAGAGAAGTACTTCCCTCTGGATTCATCCTCCAACGAGAAAGGCCTGCTGTTGAATTTTGAGGACCGCAACGGCAAGCTATGGCGGTTCCGGTACTCATACTGGAATAGTAGCCAGAGCTATGTTATGACCAAAGGTTGGAGCCGCTTCGTCAAGGAGAAGAAGCTCAACGCCGGAGACATTGTCTCGTTCCACCGCGGCGCCCGCGAGTCCTATCGGCACCGGTTGTACATAGATTGGAGGCGAAAACCTGATCACCACGGCCCACCCGGCGGCCCCGATCCCAGCCTGTTTGCACCTTTTCTTCTTCATCATCCGAATCAGTATCATCCGAACTCGCCGACGACGCAATTTTCTCAGTACTCTATCAGATGGGGCGGCCGATTGTTCTCGCTTCCCTCTCCGGCGCTACCGCCCCGACAGGTGAACCATAGTAATATGTTTCCCTTATATCATCATCAACAGCAACAAGAGCGACATCATCATCCATGGCAGTTCCAAGTCCATCATCATAATGCGATGAATTCGAGATCTGCAGGTTCGATGTATTCAAACTTGATAGGGCAACAAGAAGTAAGAAATGTTCCGATGATTATAGATTCTGTTCCAGTTGATCATTATCATTCTCATCAAAGCTGTTACCATGGCAAAAATAGTACTACTTCTACTAATAATACTACTGCTGCTGGTAAAAGACTTAGGCTATTTGGGGTGAACATGGAGTGTGCTTCTTCTTCATCACCCTCAGTAGTGGAAGAATCCAGATGTTGTAATGTGACAGTAATGGCTAACCCATCAATTTCATCTTCGTCTTCTTCTATTATCCCGCCACCTCTTCATCAGTATCTGAGGGTACCCCATGAGGATCCAATTTCATCGTCGTCGCCGGCGTCGGCCTTGTTATCATCAGCAAGATTTCAGGGTAGTCATCATCATCAGAAAGGGGAAACTTCGATGCCTTTTGATTTGGATCCCTCTTTGCATTACAGGCAGTGA 1422 0.4789 MELLMQDVKMHSDDKEEDEEEEEEEEEEDEAEIVREESSSNNAATTTIESHNSSPRLGLPSAPATNFTANHRKPDLMDLSLGGIRIGKDGEEQEEGNFQGGGSGGGGDDVGGAAIEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLNAGDIVSFHRGARESYRHRLYIDWRRKPDHHGPPGGPDPSLFAPFLLHHPNQYHPNSPTTQFSQYSIRWGGRLFSLPSPALPPRQVNHSNMFPLYHHQQQQERHHHPWQFQVHHHNAMNSRSAGSMYSNLIGQQEVRNVPMIIDSVPVDHYHSHQSCYHGKNSTTSTNNTTAAGKRLRLFGVNMECASSSSPSVVEESRCCNVTVMANPSISSSSSSIIPPPLHQYLRVPHEDPISSSSPASALLSSARFQGSHHHQKGETSMPFDLDPSLHYRQ 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00389 473 MobiDBLite consensus disorder prediction 37 68 - -
Accr7g00389 473 SMART B3_2 121 226 IPR003340 GO:0003677
Accr7g00389 473 FunFam B3 domain-containing protein 114 231 - -
Accr7g00389 473 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 26 391 IPR044800 GO:0003700
Accr7g00389 473 Coils Coil 1 39 - -
Accr7g00389 473 MobiDBLite consensus disorder prediction 1 73 - -
Accr7g00389 473 Pfam B3 DNA binding domain 121 225 IPR003340 GO:0003677
Accr7g00389 473 Gene3D - 114 230 IPR015300 -
Accr7g00389 473 MobiDBLite consensus disorder prediction 433 450 - -
Accr7g00389 473 ProSiteProfiles B3 DNA-binding domain profile. 121 224 IPR003340 GO:0003677
Accr7g00389 473 MobiDBLite consensus disorder prediction 428 473 - -
Accr7g00389 473 MobiDBLite consensus disorder prediction 14 34 - -
Accr7g00389 473 CDD B3_DNA 119 208 IPR003340 GO:0003677
Accr7g00389 473 SUPERFAMILY DNA-binding pseudobarrel domain 118 220 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00389 Accr-Chr7 5218833 5220365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00389 116 387 RAV Transcription Factor Family AT2G46870 49.648 5.06e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr7g00389 B3 4e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00389 K09287 - gmx:100781424 310.457