Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr7g00388 | ATGGAATTGCTGATGCAAGATGTCAAAATGCATTCTGATGATAAGGAAGAAGACGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGACGAAGCAGAGATTGTTAGAGAGGAAAGCAGCAGCAACAGTAAGAATAATCATTACCTTCATTTCTCGCCAAATTACGAAACTAGCACTCATCGTCATCTTCATCAAAATTCATGGTTGGGGCTTCATCATGATCACCATCACTCTCCAGATGCTGCTACCACCACCATCGAATCTCACAATTCATCACCTCGATTAGGGTTACCATCAGCACCGGCCACCAATTTCACCGCCAATCACAGAAAACCGGACCTCATGGACTTGTCGCTCGGAGGAATTCGTATCGGAAAAGATGGTGAAGAACAAGAAGAAGGTAATTTCCAAGGAGGAGGTAGCGGCGGCGGTGGTGACGATGTTGGTGGTGCTGCTATTGAGAAAGAGCACATGTTCGATAAAGTGGTGACTCCGAGTGACGTAGGCAAGCTCAACCGCCTCGTGATACCAAAGCAATACGCAGAGAAGTACTTCCCTCTGGATTCATCCTCCAACGAGAAAGGCCTGCTGTTGAATTTTGAGGACCGCAACGGCAAGCTATGGCGGTTCCGGTACTCATACTGGAATAGTAGCCAGAGCTATGTTATGACCAAAGGTTGGAGCCGCTTCGTCAAGGAGAAGAAGCTCAACGCCGGAGACATTGTCTCGTTCCACCGCGGCGCCCGCGAGTCCTATCGGCACCGGTTGTACATAGATTGGAGGCGAAAACCTGATCACCACGGCCCACCCGGCGGCCCCGATCCCAGCCTGTTTGCACCTTTTCTTCTTCATCATCCGAATCAGTATCATCCGAACTCGCCGACGACGCAATTTTCTCAGTACTCTATCAGATGGGGCGGCCGATTGTTCTCGCTTCCCTCTCCGGCGCTACCGCCCCGACAGGTGAACCATAGTAATATGTTTCCCTTATATCATCATCAACAGCAACAAGAGCGACATCATCATCCATGGCAGTTCCAAGTCCATCATCATAATGCGATGAATTCGAGATCTGCAGGTTCGATGTATTCAAACTTGATAGGGCAACAAGAAGTAAGAAATGTTCCGATGATTATAGATTCTGTTCCAGTTGATCATTATCATTCTCATCAAAGCTGTTACCATGGCAAAAATAGTACTACTTCTACTAATAATACTACTGCTGCTGGTAAAAGACTTAGGCTATTTGGGGTGAACATGGAGTGTGCTTCTTCTTCATCACCCTCAGTAGTGGAAGAATCCAGATGTTGTAATGTGACAGTAATGGCTAACCCATCAATTTCATCTTCGTCTTCTTCTATTATCCCGCCACCTCTTCATCAGTATCTGAGGGTACCCCATGAGGATCCAATTTCATCGTCGTCGCCGGCGTCGGCCTTGTTATCATCAGCAAGATTTCAGGGTAGTCATCATCATCAGAAAGGGGAAACTTCGATGCCTTTTGATTTGGATCCCTCTTTGCATTACAGGCAGTGA | 1533 | 0.4729 | MELLMQDVKMHSDDKEEDEEEEEEEEEEDEAEIVREESSSNSKNNHYLHFSPNYETSTHRHLHQNSWLGLHHDHHHSPDAATTTIESHNSSPRLGLPSAPATNFTANHRKPDLMDLSLGGIRIGKDGEEQEEGNFQGGGSGGGGDDVGGAAIEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDSSSNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLNAGDIVSFHRGARESYRHRLYIDWRRKPDHHGPPGGPDPSLFAPFLLHHPNQYHPNSPTTQFSQYSIRWGGRLFSLPSPALPPRQVNHSNMFPLYHHQQQQERHHHPWQFQVHHHNAMNSRSAGSMYSNLIGQQEVRNVPMIIDSVPVDHYHSHQSCYHGKNSTTSTNNTTAAGKRLRLFGVNMECASSSSPSVVEESRCCNVTVMANPSISSSSSSIIPPPLHQYLRVPHEDPISSSSPASALLSSARFQGSHHHQKGETSMPFDLDPSLHYRQ | 510 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr7g00388 | 510 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 20 | 428 | IPR044800 | GO:0003700 | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Accr7g00388 | 510 | Pfam | B3 DNA binding domain | 158 | 262 | IPR003340 | GO:0003677 | |
Accr7g00388 | 510 | Coils | Coil | 1 | 39 | - | - | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 69 | 97 | - | - | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 38 | 52 | - | - | |
Accr7g00388 | 510 | CDD | B3_DNA | 156 | 245 | IPR003340 | GO:0003677 | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 470 | 487 | - | - | |
Accr7g00388 | 510 | SUPERFAMILY | DNA-binding pseudobarrel domain | 155 | 257 | IPR015300 | - | |
Accr7g00388 | 510 | Gene3D | - | 151 | 267 | IPR015300 | - | |
Accr7g00388 | 510 | ProSiteProfiles | B3 DNA-binding domain profile. | 158 | 261 | IPR003340 | GO:0003677 | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 14 | 34 | - | - | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 465 | 510 | - | - | |
Accr7g00388 | 510 | SMART | B3_2 | 158 | 263 | IPR003340 | GO:0003677 | |
Accr7g00388 | 510 | MobiDBLite | consensus disorder prediction | 82 | 97 | - | - | |
Accr7g00388 | 510 | FunFam | B3 domain-containing protein | 151 | 268 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr7g00388 | Accr-Chr7 | 5218833 | 5220365 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr7g00388 | 153 | 424 | RAV Transcription Factor Family | AT2G46870 | 49.648 | 1.22e-68 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Accr7g00388 | B3 | 4.5e-28 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr7g00388 | K09287 | - | gmx:100781424 | 330.102 |