Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00385 ATGTTAGCTCCTGTTCTTTTTGGATTACTCCTCCTCCTTGCTTGCTTGCCTTTTTCTTGTGGTTCCTTTCAGAACCAAGAAAAGGTACTAGAATCATCCACTAATAATTTACTTCCCAATTCCTGCAACGAAACATGTGGGAAACACCATGTTCCTTTTCCATTCTACGTGAACTCGTCGTGTGTATCAATTTCTCATGCTTTCAATCTCTCTTGCTCGAATTCCTCTTCCCTTCTTCTGAGAATCGGCTCAGAAAACTACCCAGTTATTGAATTCTTCCCTGACGGCGTCCTTGTGGACTTCCCAGGCACATTATCATGTCGCCAGTACAATGACCTGAACTCGTTTGGTAAAAGTTTGGTGAGAAATGAACACTTTGGAGTCTCAGTGGAAAACGTCATTGGTCTCTATGACTGTGAAGATTCTTCTCTGTGCAAAGCAGATTGTGAAACAGTTGACTTGCCGGGTTGTGACGGTGACGGTGACGGTGGAGGTGGCTCACTTGGTTGCTGCTATCCACTTTCAGACCATAGTATATGGCATGTAGGAGAAGGGTTTTCAGTGTTTTCTGAGTATGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGGTCAAATTCAGGAAAACGAGGGGTAAAATTGGAATGGGCTGTTCCTAATAACTCATCCAAGCAAGTTTGTTCAAGCAATGCAGAATTAGTTAATGCTACATCAGTTGAAGGTGGAGCAAGGTGTATGTGTCAAGATGGGTATGTTGGTGATGGATTTGCTAATGGAACTGGATGCTTGCAGGCCTGTGTGAAGGATGGACATGAAGCATATGGTAGTGACTGCTACATCAGAAGAAAAGATCAAAGAAAATTTGTCATCATGGCAGGAATCCTTGGTCCAGTTCTTTTTGTTGCCTCATTACTAGCACTATTTTGTCTACTTAGAAGACCACAAAAACCAGGCTCTTTTGACAACGAGCAGGCTTACTATCACCACACCTCATTTCAAAAGGCTTGTAGAACTCAGTTGTTCAGCCCCCGCGAGCTAGAGGAAGCCACGAAAGATTTTGCTGAGGATCAGAAACTCATGCAGAGCAGCAACAATGGTACAATTTTCGCCGGTGTTCTTGGGGATGGATCACATGCAGCTGTCCACAAGTTGCAATATGATACTGAGAAAGACCTTATACAAGTCCTGGCACAAATTGAGGTCCTATCTGCTATTTCACATAAGAACTTGGCCCGCCTTCTCGGATGCTGTATAGATTCTGGCTATCCTTCTGTGGTTGTCTATGAGTATCCTGCAAATGGGACCTTGGAGGACCATTTACGTCAAAGAAAGGGACATAAACTTTGTTTGGACTGGAACAATAGATTGATTATTGCTGCAGAAACAGCAAATGTTCTTGCATTCTTACAATATGACACTTCCCCTCCCATATTCCACCACAACCTTAAACCTGGTTGCATATTCCTAGATGATGATTTCTCTGTCAAGATTGCAGGATTTAGGCTTGTCAATACCAAATTCAACTATCGCTATGATAACAATATTGAAGGCTTGAATTTCTGCAAGAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAGATCATTTCAGGCTCAAATAATCACTTGAACACACCAACCCAGGCACTTCAGAAGATTAGGACAGGGAAGCTCGAAGAAATCATCGATCCCCTTCTCTACTACCACGAGCAAACTCGTTCTTGCCAAGAACAGATACAAATAATAGCGGACCTAGCAACAAGATGTATGTTGTTTGGTTCAGATGGGAAGCTGCGAATGATTGATGTTGCAAGAGAGTTGACACACATAACAAAAGAGAGTGTTGATGGAGGAATCACAAGAGGAGGACCTGCTTTGGAAGAGACATTCTCAAATTCTAGCCTTCTTCAGATGATATCCATGTCTCCTGATTCTATGCATGTACCTTAA 1953 0.4265 MLAPVLFGLLLLLACLPFSCGSFQNQEKVLESSTNNLLPNSCNETCGKHHVPFPFYVNSSCVSISHAFNLSCSNSSSLLLRIGSENYPVIEFFPDGVLVDFPGTLSCRQYNDLNSFGKSLVRNEHFGVSVENVIGLYDCEDSSLCKADCETVDLPGCDGDGDGGGGSLGCCYPLSDHSIWHVGEGFSVFSEYGCRGFSSWAVLRGSNSGKRGVKLEWAVPNNSSKQVCSSNAELVNATSVEGGARCMCQDGYVGDGFANGTGCLQACVKDGHEAYGSDCYIRRKDQRKFVIMAGILGPVLFVASLLALFCLLRRPQKPGSFDNEQAYYHHTSFQKACRTQLFSPRELEEATKDFAEDQKLMQSSNNGTIFAGVLGDGSHAAVHKLQYDTEKDLIQVLAQIEVLSAISHKNLARLLGCCIDSGYPSVVVYEYPANGTLEDHLRQRKGHKLCLDWNNRLIIAAETANVLAFLQYDTSPPIFHHNLKPGCIFLDDDFSVKIAGFRLVNTKFNYRYDNNIEGLNFCKNDVYDMGVLLLEIISGSNNHLNTPTQALQKIRTGKLEEIIDPLLYYHEQTRSCQEQIQIIADLATRCMLFGSDGKLRMIDVARELTHITKESVDGGITRGGPALEETFSNSSLLQMISMSPDSMHVP 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00385 650 Gene3D Transferase(Phosphotransferase) domain 1 433 619 - -
Accr7g00385 650 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 32 612 IPR045274 GO:0007166
Accr7g00385 650 Pfam Protein tyrosine and serine/threonine kinase 362 538 IPR001245 GO:0004672|GO:0006468
Accr7g00385 650 Gene3D Phosphorylase Kinase; domain 1 325 431 - -
Accr7g00385 650 ProSiteProfiles Protein kinase domain profile. 355 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00385 650 Gene3D Laminin 225 259 - -
Accr7g00385 650 SUPERFAMILY Protein kinase-like (PK-like) 337 608 IPR011009 -
Accr7g00385 650 Pfam Wall-associated receptor kinase galacturonan-binding 42 91 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00385 Accr-Chr7 5159725 5162615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00385 33 611 Receptor kinase-like Gene Family AT2G23450 29.308 1.81e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Accr7g00385 PK_Tyr_Ser-Thr 4.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00385 - - vra:106760020 884.019