Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00379 ATGGAGAGGCTTCAAGGACCCATCAATTCCTGTTTCGTTGGTGAGTATTTGGGTGGGAACTTTCAATCCGATGAAGAAGAAGAGCATTTGATATCACTATCGAGTTTGGAGGATAAAATGCCATTTCTTGAGATGCTTCAGAGTGTGGAATCTCAAACCCCACAATTATTTCCCTCCAAAGATTCCAACTTTCAGTTTCAGACACTTGTAAACGAGAAGACACCATGCGAAGAAGAGAGGGAAAGAACAACGTGCTTATCTAGAACAATGGAGACTCAAATTCACGCGCCGCCGGAGCTAGAGAGCTGCGTCACTCACGACACGGCGGAGATGCCGTCGCCGCCGTCGCCGTCGCCGTCGCCGGCGAAATCTGGGAACTGTAGGAGAAAAAGGAAGAGAACAACGAGACTAATTAAGAGCAGGGAAGATGTGGAGAATCAACGCATGACCCACATTGCCGTCGAACGCAACCGCCGCCGTCAAATGAACGACCACCTTACTGTTCTCAAATCACTCATGCCCCCTTCCTATATTCAAAAGGGAGACCAAGCGTCCATTATTGGAGGTGCAATAGATTTTGTGAAGGGATTGGAGCATCTGCATCAATGTCTGGAAGCACAGAAAAGAATAAGAAGGAACGATGAGATTGAATTCAGCTATGGAACGACGTCGTGCGGAGGAGGAGAAGAATCATACTTTGGTGGAGAAGTGAAAGCAGAGAACAAGTCAGATATAGCAGAAATAGAAGTAACTCTGATTCAAAACCATGTGAGTCTGAAAGTTCAGTGCAAGAGAAGAAGTGGGCAGTTGGTGAAGACCATAATGGGTCTTGAGGATCTTCGGCTAACTATTCTGCACCTAAACATAACATCCTCACAGGCCTCGGTTCTTTACTGCTTCAATCTCAAGATAGAAGAAGAGTGTAAAGTAGTGACAGCAAGTGAAATTGCAGGAGCAGTTCAAGAGATGTTGAGGTTCATCAATGGAAGCTAG 993 0.4582 MERLQGPINSCFVGEYLGGNFQSDEEEEHLISLSSLEDKMPFLEMLQSVESQTPQLFPSKDSNFQFQTLVNEKTPCEEERERTTCLSRTMETQIHAPPELESCVTHDTAEMPSPPSPSPSPAKSGNCRRKRKRTTRLIKSREDVENQRMTHIAVERNRRRQMNDHLTVLKSLMPPSYIQKGDQASIIGGAIDFVKGLEHLHQCLEAQKRIRRNDEIEFSYGTTSCGGGEESYFGGEVKAENKSDIAEIEVTLIQNHVSLKVQCKRRSGQLVKTIMGLEDLRLTILHLNITSSQASVLYCFNLKIEEECKVVTASEIAGAVQEMLRFINGS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00379 330 PANTHER MAX DIMERIZATION, MAD 96 327 - -
Accr7g00379 330 Pfam Helix-loop-helix DNA-binding domain 147 198 IPR011598 GO:0046983
Accr7g00379 330 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 197 IPR011598 GO:0046983
Accr7g00379 330 SMART finulus 152 203 IPR011598 GO:0046983
Accr7g00379 330 CDD bHLH_AtFAMA_like 149 222 - -
Accr7g00379 330 Gene3D - 138 214 IPR036638 GO:0046983
Accr7g00379 330 MobiDBLite consensus disorder prediction 106 137 - -
Accr7g00379 330 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 220 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00379 Accr-Chr7 5072426 5074311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00379 31 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 43.354 2.46e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g00379 HLH 3.8e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00379 - - pcin:129291729 461.455