Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00375 ATGGGTGAAGCGGTTCTGGCTAGCGGTGAAAAGTGGACGGTGGACATGGAAGAGAAGATGAACACCATGAACCAGCTGAAGGATGAGAGCTCCTCAGAAATGGTTAATTGGGACAAGCTTCTTCCTCAGATGGTGCTTAGAGTTCTGCTGGTGGAAGCTGATGATTCCACTCGTCAGATTATCGCAGCCCTTCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAAATATTGAAGAAGAAAGCTCCTGATATTGATCTCATATTAACTGACGTGGAGCTGCCGTCAATATCTGGATTTGCACTTCTTACTTTAATCAAGGAGCATGAAATTTGTAGAAACATTCCCGTCACAATGATGTCTTCTCATGATTCTATTAGCACGGCAATGAAATGCATATTAAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGAACTATCCACCTTGTGGCGACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAAACAATGCTGCTAGCAATCATACAACAGGTTCTGTGGCTTCCACACAGAAAAAAAATGAGTGCTGCGAGAAAAGGAGTGAGTCCCAAGATACGTCCCAGCCCAGGAGTCCTTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAATCTGCGAAACTTGAAAGGAACTCTGCTAAACATAATAGTGAAACTACAAAGAGGTCGACTAGTTATTCATCCGAGGCTGCTAGGTGCAATGGCAATATTAACTTGACAAGTTCAAGGCTGGTGCAAGACAATTTTGCTGAAACAGAAAATGAGGATGAATCTTTAAGAGCAGAGTCAAATAGAGACAATCCTAATGGTGATACAGAGATTCATGGCTGCAATAATGAATTGGTAGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTTGAGAATATTCCAAAGAATGCTGGTAAGAATTATAGTCTTGCTGATGGTGGGAAGGACAAGTTTGATTTTGACCCGCAATTGGAACTTTCCTTGAGAACTTTTTCTGGTTGCTCATGTAAAGAAGAACCTGAAGAAAGGCAAACGTTGAACCATTCAAATGCATCTGCCTTTTCTTGGTATAGTAGTAATAAGTTGTCACAGCCCCTTTTTCCAGCATTACCAATGAGTTCTGCCAAAGCATATAGTACTGAGCTGAATTCCCAGAATTATACTGAGATATCTGGAATTGATACTTCTTATCAGTATGGCGGGGCGAATCATACTCAGGAGAATAGAATCCCACTGGTTCTTCACCAGTCTGGACAAGTTGGAGCACAATTGCCAAACAGTTATCCTGAATCCTCTCCTGCTACTGGCGTTACTTCTGATCATATGTTTAGTAGATACGAGAATGTTGAGCCTTCTATATTCTACACACAATCCGGTGCTCATCGCATGTGGAGTTCAAAATCAGTCAGCCAGAAAGAGAATTCTCCCTTTCCCGCAACCACTTCATTCCTGTCAAATGCTGAAAGTCACAGCTCTGAACAACATCATCATTGGTCTGAGGCCAGCTGTGCTTCTCTTGATAAGAAGACAGGGCGTGATAAAAGCTACTTGGATCTTACAATGCATGATTATCCAGGTGCTCATCAGAATAACTGCGTTAGCTTATGCCGTGACATGCCAAACCATATTAATGATGGTTCAAATGGAAGTATAAGCAGTATAAGAGAAGGAGATCATACTTCAGCTGTGGTAATCGAGAAAACCCTTGAAAGCTTTAGTGACAATGGTTATCATGATTATGATGAATACGGAGGGGCAGATTCTCTGCGTCCCAGCCAAAGGGAAGCTGCTCTAACAAAGTTCCGACTGAAAAGGAAAGACAGATGCTTTGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGGATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAATGATTGTCCAATTGTTGATTCTGGTGGTGATGGTTCCTGA 2019 0.4225 MGEAVLASGEKWTVDMEEKMNTMNQLKDESSSEMVNWDKLLPQMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWEILKKKAPDIDLILTDVELPSISGFALLTLIKEHEICRNIPVTMMSSHDSISTAMKCILKGAADFLIKPVRRNELSTLWRHVWRRHPKKLEATSENNAASNHTTGSVASTQKKNECCEKRSESQDTSQPRSPSNLSNIDTVKYEESAKLERNSAKHNSETTKRSTSYSSEAARCNGNINLTSSRLVQDNFAETENEDESLRAESNRDNPNGDTEIHGCNNELVEPSRGAIDLIATFENIPKNAGKNYSLADGGKDKFDFDPQLELSLRTFSGCSCKEEPEERQTLNHSNASAFSWYSSNKLSQPLFPALPMSSAKAYSTELNSQNYTEISGIDTSYQYGGANHTQENRIPLVLHQSGQVGAQLPNSYPESSPATGVTSDHMFSRYENVEPSIFYTQSGAHRMWSSKSVSQKENSPFPATTSFLSNAESHSSEQHHHWSEASCASLDKKTGRDKSYLDLTMHDYPGAHQNNCVSLCRDMPNHINDGSNGSISSIREGDHTSAVVIEKTLESFSDNGYHDYDEYGGADSLRPSQREAALTKFRLKRKDRCFEKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPIVDSGGDGS 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00375 672 MobiDBLite consensus disorder prediction 208 223 - -
Accr7g00375 672 ProSiteProfiles CCT domain profile. 615 657 IPR010402 GO:0005515
Accr7g00375 672 MobiDBLite consensus disorder prediction 273 301 - -
Accr7g00375 672 Gene3D - 44 270 - -
Accr7g00375 672 SUPERFAMILY CheY-like 46 177 IPR011006 -
Accr7g00375 672 ProSiteProfiles Response regulatory domain profile. 47 165 IPR001789 GO:0000160
Accr7g00375 672 MobiDBLite consensus disorder prediction 273 292 - -
Accr7g00375 672 MobiDBLite consensus disorder prediction 492 521 - -
Accr7g00375 672 Pfam CCT motif 615 657 IPR010402 GO:0005515
Accr7g00375 672 MobiDBLite consensus disorder prediction 172 252 - -
Accr7g00375 672 Pfam Response regulator receiver domain 48 159 IPR001789 GO:0000160
Accr7g00375 672 PANTHER TWO-COMPONENT RESPONSE REGULATOR 46 298 IPR045279 GO:0009736
Accr7g00375 672 MobiDBLite consensus disorder prediction 225 240 - -
Accr7g00375 672 MobiDBLite consensus disorder prediction 175 194 - -
Accr7g00375 672 SMART REC_2 46 161 IPR001789 GO:0000160
Accr7g00375 672 MobiDBLite consensus disorder prediction 492 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00375 Accr-Chr7 5030592 5034627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00375 614 659 Response Regulator Gene Family AT5G24470 91.304 1.03e-20 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr7g00375 Response_reg 3.5e-23 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00375 K12130 - gmx:100779346 656.366