Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00374 ATGGGTGAAGCGGTTCTGGCTAGCGGTGAAAAGTGGACGGTGGACATGGAAGAGAAGATGAACACCATGAACCAGCTGAAGGATGAGAGCTCCTCAGAAATGGTTAATTGGGACAAGCTTCTTCCTCAGATGGTGCTTAGAGTTCTGCTGGTGGAAGCTGATGATTCCACTCGTCAGATTATCGCAGCCCTTCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCGTGGGAAATATTGAAGAAGAAAGCTCCTGATATTGATCTCATATTAACTGACGTGGAGCTGCCGTCAATATCTGGATTTGCACTTCTTACTTTAATCAAGGAGCATGAAATTTGTAGAAACATTCCCGTCACAATGATGTCTTCTCATGATTCTATTAGCACGGCAATGAAATGCATATTAAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGAACTATCCACCTTGTGGCGACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAAACAATGCTGCTAGCAATCATACAACAGGTTCTGTGGCTTCCACACAGAAAAAAAATGAGTGCTGCGAGAAAAGGAGTGAGTCCCAAAGCGCTTGTACATCACCTATTTTAGAAGCTGAGAGTGCATACGTGCAAAATATGCAGGATACGTCCCAGCCCAGGAGTCCTTCAAATTTGAGCAACATTGACACAGTGAAGTATGAAGAATCTGCGAAACTTGAAAGGAACTCTGCTAAACATAATAGTGAAACTACAAAGAGGTCGACTAGTTATTCATCCGAGGCTGCTAGGTGCAATGGCAATATTAACTTGACAAGTTCAAGGCTGGTGCAAGACAATTTTGCTGAAACAGAAAATGAGGATGAATCTTTAAGAGCAGAGTCAAATAGAGACAATCCTAATGGTGATACAGAGATTCATGGCTGCAATAATGAATTGGTAGAACCTTCTAGAGGAGCTATTGACTTGATTGCTACATTTGAGAATATTCCAAAGAATGCTGGTAAGAATTATAGTCTTGCTGATGGTGGGAAGGACAAGTTTGATTTTGACCCGCAATTGGAACTTTCCTTGAGAACTTTTTCTGGTTGCTCATGTAAAGAAGAACCTGAAGAAAGGCAAACGTTGAACCATTCAAATGCATCTGCCTTTTCTTGGTATAGTAGTAATAAGTTGTCACAGCCCCTTTTTCCAGCATTACCAATGAGTTCTGCCAAAGCATATAGTACTGAGCTGAATTCCCAGAATTATACTGAGATATCTGGAATTGATACTTCTTATCAGTATGGCGGGGCGAATCATACTCAGGAGAATAGAATCCCACTGGTTCTTCACCAGTCTGGACAAGTTGGAGCACAATTGCCAAACAGTTATCCTGAATCCTCTCCTGCTACTGGCGTTACTTCTGATCATATGTTTAGTAGATACGAGAATGTTGAGCCTTCTATATTCTACACACAATCCGGTGCTCATCGCATGTGGAGTTCAAAATCAGTCAGCCAGAAAGAGAATTCTCCCTTTCCCGCAACCACTTCATTCCTGTCAAATGCTGAAAGTCACAGCTCTGAACAACATCATCATTGGTCTGAGGCCAGCTGTGCTTCTCTTGATAAGAAGACAGGGCGTGATAAAAGCTACTTGGATCTTACAATGCATGATTATCCAGGTGCTCATCAGAATAACTGCGTTAGCTTATGCCGTGACATGCCAAACCATATTAATGATGGTTCAAATGGAAGTATAAGCAGTATAAGAGAAGGAGATCATACTTCAGCTGTGGTAATCGAGAAAACCCTTGAAAGCTTTAGTGACAATGGTTATCATGATTATGATGAATACGGAGGGGCAGATTCTCTGCGTCCCAGCCAAAGGGAAGCTGCTCTAACAAAGTTCCGACTGAAAAGGAAAGACAGATGCTTTGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGGATAAAAGGGCAGTTTGTGCGTCAAGTGCAAAATGATTGTCCAATTGTTGATTCTGGTGGTGATGGTTCCTGA 2076 0.4224 MGEAVLASGEKWTVDMEEKMNTMNQLKDESSSEMVNWDKLLPQMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWEILKKKAPDIDLILTDVELPSISGFALLTLIKEHEICRNIPVTMMSSHDSISTAMKCILKGAADFLIKPVRRNELSTLWRHVWRRHPKKLEATSENNAASNHTTGSVASTQKKNECCEKRSESQSACTSPILEAESAYVQNMQDTSQPRSPSNLSNIDTVKYEESAKLERNSAKHNSETTKRSTSYSSEAARCNGNINLTSSRLVQDNFAETENEDESLRAESNRDNPNGDTEIHGCNNELVEPSRGAIDLIATFENIPKNAGKNYSLADGGKDKFDFDPQLELSLRTFSGCSCKEEPEERQTLNHSNASAFSWYSSNKLSQPLFPALPMSSAKAYSTELNSQNYTEISGIDTSYQYGGANHTQENRIPLVLHQSGQVGAQLPNSYPESSPATGVTSDHMFSRYENVEPSIFYTQSGAHRMWSSKSVSQKENSPFPATTSFLSNAESHSSEQHHHWSEASCASLDKKTGRDKSYLDLTMHDYPGAHQNNCVSLCRDMPNHINDGSNGSISSIREGDHTSAVVIEKTLESFSDNGYHDYDEYGGADSLRPSQREAALTKFRLKRKDRCFEKKVRYQSRKRLAEQRPRIKGQFVRQVQNDCPIVDSGGDGS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00374 691 MobiDBLite consensus disorder prediction 511 529 - -
Accr7g00374 691 ProSiteProfiles CCT domain profile. 634 676 IPR010402 GO:0005515
Accr7g00374 691 Gene3D - 44 273 - -
Accr7g00374 691 PANTHER TWO-COMPONENT RESPONSE REGULATOR 46 298 IPR045279 GO:0009736
Accr7g00374 691 ProSiteProfiles Response regulatory domain profile. 47 165 IPR001789 GO:0000160
Accr7g00374 691 Pfam Response regulator receiver domain 48 159 IPR001789 GO:0000160
Accr7g00374 691 MobiDBLite consensus disorder prediction 246 271 - -
Accr7g00374 691 MobiDBLite consensus disorder prediction 292 311 - -
Accr7g00374 691 MobiDBLite consensus disorder prediction 511 540 - -
Accr7g00374 691 MobiDBLite consensus disorder prediction 175 194 - -
Accr7g00374 691 MobiDBLite consensus disorder prediction 172 194 - -
Accr7g00374 691 Pfam CCT motif 634 676 IPR010402 GO:0005515
Accr7g00374 691 SMART REC_2 46 161 IPR001789 GO:0000160
Accr7g00374 691 MobiDBLite consensus disorder prediction 292 319 - -
Accr7g00374 691 SUPERFAMILY CheY-like 46 178 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00374 Accr-Chr7 5030592 5034627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00374 633 678 Response Regulator Gene Family AT5G24470 91.304 1.15e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Accr7g00374 Response_reg 3.7e-23 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00374 7 5030592 5034627 Accr7g00374 7 5030592 5034627 ECH