Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00368 ATGTCTCATCCAAGGCAATTCCAGATGGTGGGTGGTGGTGCTAATAATCCTGCAGGGCATTACAATGACACAACTTTTACTAAAATCTTTGTTGGTGGATTGGCTTGGGAGACTCAAAGGGACACAATGAGGAGGTATTTTGAGCAGTTTGGTGAGATCCTTGAGGCTGTTGTTATCACAGACAAGAACACTGGGAGATCCAAGGGTTATGGCTTTGTTACATTTAAGGATCCAGAAGCAGCCATGAGAGCATGTCAGAATCCTTCTCCAGTTATTGATGGAAGAAGAGCAAATTGCAATCTTGCATCTCTTGGAGCAAACAAGAATCGCCCACCAACTCCTCCACATGGAGCAGGAAGGTTCAGACCAGGACCTGGACTTGTGGCTACACCTGCATACCATGGCTCTTCCTCTTCTACATTTTTCCATCAGCCCTCTGGCCAATACACATTTCCTTATTCAGCTTATGGGTATTCTGGATATTCACAAGACACCATGTATCCCATGAACTATTATAGTGTGTATGGAGCAGGAGGTCAACAGTTTTCACCATATTACACTTCCAGTGGGGCATCTGGGCCACCAGGACTAGTCCATAATGTTTACCCTTTCTATGCTCAGACTAGCCAGCAGGCTCATAATCAAGGCTTTGGACTTCATCAATACCCTCAAATGCTACAGTTCCCATTTCTTCCACAGCACTATGCCTCCTCTGGGATCCTCTCTTTTCCTTCTTCAATGCCACTGTCGTCAACAACAACAACTAGTGCAGCTGCAACAACGGCGACAACAACAGCTGCAGCAGCAACAGTAGCAGCAGCAGCAACAGCAACAACTGGGGCAGGTGCTTCACAATCTTCTTCAGGAACAGCTTCTGAGCAAAAATCTTCAACTTAG 897 0.4593 MSHPRQFQMVGGGANNPAGHYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTPPHGAGRFRPGPGLVATPAYHGSSSSTFFHQPSGQYTFPYSAYGYSGYSQDTMYPMNYYSVYGAGGQQFSPYYTSSGASGPPGLVHNVYPFYAQTSQQAHNQGFGLHQYPQMLQFPFLPQHYASSGILSFPSSMPLSSTTTTSAAATTATTTAAAATVAAAATATTGAGASQSSSGTASEQKSST 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00368 298 Gene3D - 4 115 IPR012677 -
Accr7g00368 298 CDD RRM_RBM24_RBM38_like 27 102 - -
Accr7g00368 298 SMART rrm1_1 28 100 IPR000504 GO:0003723
Accr7g00368 298 PANTHER BOULE-RELATED 18 266 - -
Accr7g00368 298 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 86 IPR000504 GO:0003723
Accr7g00368 298 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 104 IPR000504 GO:0003723
Accr7g00368 298 SUPERFAMILY RNA-binding domain, RBD 20 126 IPR035979 GO:0003676
Accr7g00368 298 FunFam RNA-binding protein 24-B isoform X1 14 120 - -
Accr7g00368 298 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00368 Accr-Chr7 4947258 4949201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00368 23 103 C2H2 Transcription Factor Family AT2G19380 44.444 3.31e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00368 - - qsu:111994039 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00368 7 4947258 4949201 Accr7g00368 7 4947258 4949201 ECH