Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00337 ATGTCAGTCCATTATAGTGAATTCTCTCATTCTGCAGCAGCAGAAGCATATAACAGCACAACACCAACTTCTTCTTCTTCTTCATCACCAACAAGAACTTGCAGTATCAGGAAGAAGAAGAATAGCAGCAGCAAGAAAAGGTTCAGTGATGATCAAATCAAGTTATTAGAGTCCATTTTTGAGACAGAGTCCAAGCTTGACCACACAAAAAAATTGCAGCTTGCTTCTGAACTTGGCTTGCAGCCACGCCAGGTAGCCATATGGTTCCAGAACAGACGAGCTCGATCCAAATCCAAGCACATCCAACGTTCCTACAATCTACTCCAAGAAAATTATGATGCTTTGGCTTCCAAATTTGAAGCCCTCAAGAAGGAGAATCATGCATTACTGCAAGAGTTGCAGAAGCTGAGAGATTTGGAAGATCGGAACTTTTGTTATAAGAAAGTGAGAGATGAGAATTTGATGAACAGAGAATGTGGTAAAGCAGAGGTGAAGCAGAGTAGTTCATCAATGGAAAGATCAGAAAAGGTACTTGGGGTTCTTTCAGATGATGATAGGAGCTTAAGGACAGAGTATTTTGGGCTTGAAGAAGAAGAACCTACAATTCTGAACTCACAAGAAGTTTGGAGAAATCTTAAATCTACCGATGAACTCTTACCCCAGTCTGATGACAGTGCTTATCAATGGGGGGACTTTTGGTCCTGA 705 0.4113 MSVHYSEFSHSAAAEAYNSTTPTSSSSSSPTRTCSIRKKKNSSSKKRFSDDQIKLLESIFETESKLDHTKKLQLASELGLQPRQVAIWFQNRRARSKSKHIQRSYNLLQENYDALASKFEALKKENHALLQELQKLRDLEDRNFCYKKVRDENLMNRECGKAEVKQSSSSMERSEKVLGVLSDDDRSLRTEYFGLEEEEPTILNSQEVWRNLKSTDELLPQSDDSAYQWGDFWS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00337 234 Coils Coil 105 142 - -
Accr7g00337 234 MobiDBLite consensus disorder prediction 15 47 - -
Accr7g00337 234 PRINTS Lambda-repressor HTH signature 70 79 IPR000047 GO:0003677
Accr7g00337 234 PRINTS Lambda-repressor HTH signature 79 95 IPR000047 GO:0003677
Accr7g00337 234 MobiDBLite consensus disorder prediction 15 37 - -
Accr7g00337 234 Pfam Homeobox associated leucine zipper 99 139 IPR003106 GO:0006355|GO:0043565
Accr7g00337 234 Pfam Homeodomain 44 97 IPR001356 GO:0003677
Accr7g00337 234 Gene3D - 35 107 - -
Accr7g00337 234 CDD homeodomain 50 100 IPR001356 GO:0003677
Accr7g00337 234 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Accr7g00337 234 ProSitePatterns 'Homeobox' domain signature. 74 97 IPR017970 GO:0000981|GO:0006355
Accr7g00337 234 SMART HOX_1 41 103 IPR001356 GO:0003677
Accr7g00337 234 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 35 184 IPR045224 GO:0003700
Accr7g00337 234 SUPERFAMILY Homeodomain-like 20 99 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00337 Accr-Chr7 4420563 4421382 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00337 27 234 Homeobox Transcription Factor Family AT2G46680 42.276 1.01e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr7g00337 Homeodomain 2.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00337 K09338 - qsa:O6P43_027419 194.512