Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00308 ATGGGAAGAGCTCCATGTTGTGCAAAAGTAGGGTTACACAGAGGTCCATGGACCCCAAAAGAAGATGCAGTGCTCACTAAGTATATTCAAGCTCATGGCGAGGGTCAATGGAAATCTCTTCCTAAAAAAGCTGGGCTTCTGAGATGTGGGAAAAGTTGCAGACTGAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGCAACATAACTGCTGAAGAAGACGACCTCATCATCAGAATGCATGCTCTGATCGGAAACCGGTGGTCTCTCATCGCCGGCCGATTACCAGGACGAACCGATAACGAAATCAAGAACTACTGGAACACTCATCTCAGCAAAGGAGTCAAAGCACAACAATCCAAGTCTGATCATCCCCAACCATTAAGCAACAACACCGACGATAAGGCCAAGAATAAAATCATGAAGAAGAAGAAGAAGCCCGCAAAAAAGGAGAGTAAGAATAAATCCAACAGTGTCGACGAAGAAGCAGAGAAGAAGACCATTACATATCTTCCAAAACCCATTAGGGTTAGGGCTTTACATATAAGTGGTGGAAACAAAAAATATTCTAAGAACAGTTCTTCTTCAGCAAGTGGATCTTCAAGCCTACAAGAGTTGTTACCACAGAAGCAAGATATGGATAATTATGCAATGAGTTATGAGCCTTGGGTTGGTGAACATGATCTGCTTGGGTTTTCTGTGGAAGAAGATCAGAATATTGACCGAGTAAACGGCTCAATATCAGAAGAAAATATTATTAATAATATTGATGATATGGAATGCGAGTCACTGGAGAGGTTATACGAGGAGTATTTGCAGCTCTTGAAGGACGATAATAATGTTAGTGGTGAAAACCAAGGGCAACTGTTGGAATCTTTTGATCAATCTTTGTTTCTCTAA 903 0.4142 MGRAPCCAKVGLHRGPWTPKEDAVLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITAEEDDLIIRMHALIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKGVKAQQSKSDHPQPLSNNTDDKAKNKIMKKKKKPAKKESKNKSNSVDEEAEKKTITYLPKPIRVRALHISGGNKKYSKNSSSSASGSSSLQELLPQKQDMDNYAMSYEPWVGEHDLLGFSVEEDQNIDRVNGSISEENIINNIDDMECESLERLYEEYLQLLKDDNNVSGENQGQLLESFDQSLFL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00308 300 SMART sant 13 63 IPR001005 -
Accr7g00308 300 SMART sant 66 114 IPR001005 -
Accr7g00308 300 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr7g00308 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr7g00308 300 MobiDBLite consensus disorder prediction 183 205 - -
Accr7g00308 300 CDD SANT 16 61 IPR001005 -
Accr7g00308 300 Gene3D - 14 66 - -
Accr7g00308 300 FunFam Myb transcription factor 11 67 - -
Accr7g00308 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Accr7g00308 300 MobiDBLite consensus disorder prediction 115 135 - -
Accr7g00308 300 Gene3D - 69 129 - -
Accr7g00308 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr7g00308 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr7g00308 300 MobiDBLite consensus disorder prediction 187 205 - -
Accr7g00308 300 CDD SANT 71 112 IPR001005 -
Accr7g00308 300 MobiDBLite consensus disorder prediction 115 166 - -
Accr7g00308 300 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 217 - -
Accr7g00308 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Accr7g00308 300 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00308 Accr-Chr7 4124689 4126161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00308 1 129 MYB Transcription Factor Family AT5G49330 68.217 1.24e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr7g00308 Myb_DNA-binding 6.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00308 K09422 - gmx:100101857 276.944