Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00303 ATGGCACATCTGGGGTGTAATCTCAGAGGCCCGACGAGTTCTCCGGCGAATACAGGTTTGGAAGATGACGGTCTGTATACAGAGTTATGGAAATTATGTGCTGGGCCTCTGGTGGATGTTCCTCGTGCTATGGAGAGAGTTTTTTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCAACGAATCAGGAATTGAACCAACAAATTCCCCATTTCAACATTTCATCTAAGATTCTATGCCGTGTTGTGGACATTCAGTTATTGGCGGAACCAGACACTGATGAAGTTTATGCTCGTATTACTTTGCTTCCAGAACCAGATCAAACTGAGCCTGCCAGCTCTGATCCATCTCCATCGGAGACTGGGACGCAGGCTTTTCATTCATTTTGCAAAATACTAACAGCATCTGATACTAGCACGCATGGAGGGTTTTCAGTTCTTCGGAAGCATGCTAATGAGTGCTTGCCACAATTGGACATGACCCAAGCAACCCCTACTCAGGAGTTAGCAGCAAAGGATCTTCATGGATTTGAGTGGAAATTCAAGCATATATTCAGAGGTCAACCAAGAAGACACTTGCTTACAACCGGTTGGAGTACATTTGTCACTTCCAAAAGGCTGGTAGCCGGAGATGCATTCGTGTTTTTGAGGGGAGAAAATGGAGAACTGAGAGTTGGTGTCCGGCGCCAAGCCCGGCAACAGAGTCCAATGCCTTCATCTGTGATATCAAGCCAGAGCATGCATCTTGGAGTGCTTGCCACTGCTTCCCATGCCGTTGCCACTAGTACTATGTTTGTAGTTTACTACAAACCAAGGACTAGACAGTATATTATTGGTTTAAACAAATATCTGGAGGCAATCAACAATAAGTTCACTGTTGGCATGCGCTTCAAGATGAGATTTGAGGGAGATGATTCACCTGAGAGAAGGTTTTCGGGAACTATTGTTGGCGTTGGTGATTTATCTACAGATTGGCCAGACTCAAAGTGGCGGTCATTGAAGGTACAATGGGATGAGCCTGCAACAATCCCAAGGCCAGAGAGGGTTTCTCCTTGGGAGATAGAACCTTTTGTTGCTTCTGCGCCTATAAATCTCGCTCAACCAGCGGTAAAGAGCAAAAGATCTCGGCCTGCTGATGTTCCTTCTTCTGAAATGGTTTCCAATCCAGCTGCTTCAGCTTTCTGGTATCACGGGTCATCCCAGTCCCATGAACTTGCACAATTAGGCGGCACAACAGAAGCCCAAAGTAATGAAAACCAGGTTTTATGGAATGCAAGGCAGAACAACATAAATGGCCATGCTATGAACAACAGTAGCTCCTGCAACTCCAGAGTCCGGGTTGAAGGGCCATGGCCTTCATCACATTTGAACTGTTTCCCTGACCCCAAAAACAACAAGGCTGTTGCAGTTCAGTCTTCTATTTCTGGTTATCCTCCTCCTGGCTCTTCTTGGCCAAATGATGCTTCAGCTTATGATCAAGTTGAGAATGCAAAGAAATGTGAGAATCCCGTGGGGTGCCGACTATTTGGTGTCAATTTGACTAAGAACCCTAACAATGTTGCTCCTCCAGAGAAAGAATCAAGAGGCTGCACTGCTAGTCCCATTGGTTCCAAAGAATCTGTTCCTGTTGTTGCATGTGAAACTAAGACAAATCAGAATCCCAATTGTTTAGTGTCCAAAAAGGAGCTGAAGCAAGAAATGTCTAATGCTTCACCAAATAATGAGAGGCAGAGCAAGCAGGCATCTTTACCATCCACCAGGACTCGCACAAAGGTACAAATGCAAGGAGTGGCTGTTGGTCGTGCCGTTGACTTGACTACGTTGGATGGTTATGAAAGTCTGATCGAAGAGCTTGAAAAGTTGTTCAACATTAAAGGAGAGCTTCGTACGCAGAACAAATGGGCGGTTACTTTCACAGATGATGAGAATGATATGATGCTCGTGGGCGATGATCCGTGGCCGGAGTTTTGTAAAATGGTGAAGAGGATTATAATATATTCAAGGGAGGAAGTGAAGAAGATGAATGCAGTATGCCCAGTTCCTGCATCTTCATCAGAGGATGAAGAAACTCTGATCACAGTGAATTCAGAGAATAAGGATGAAAGTCAGTAA 2115 0.4506 MAHLGCNLRGPTSSPANTGLEDDGLYTELWKLCAGPLVDVPRAMERVFYFPQGHMEQLQASTNQELNQQIPHFNISSKILCRVVDIQLLAEPDTDEVYARITLLPEPDQTEPASSDPSPSETGTQAFHSFCKILTASDTSTHGGFSVLRKHANECLPQLDMTQATPTQELAAKDLHGFEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRQARQQSPMPSSVISSQSMHLGVLATASHAVATSTMFVVYYKPRTRQYIIGLNKYLEAINNKFTVGMRFKMRFEGDDSPERRFSGTIVGVGDLSTDWPDSKWRSLKVQWDEPATIPRPERVSPWEIEPFVASAPINLAQPAVKSKRSRPADVPSSEMVSNPAASAFWYHGSSQSHELAQLGGTTEAQSNENQVLWNARQNNINGHAMNNSSSCNSRVRVEGPWPSSHLNCFPDPKNNKAVAVQSSISGYPPPGSSWPNDASAYDQVENAKKCENPVGCRLFGVNLTKNPNNVAPPEKESRGCTASPIGSKESVPVVACETKTNQNPNCLVSKKELKQEMSNASPNNERQSKQASLPSTRTRTKVQMQGVAVGRAVDLTTLDGYESLIEELEKLFNIKGELRTQNKWAVTFTDDENDMMLVGDDPWPEFCKMVKRIIIYSREEVKKMNAVCPVPASSSEDEETLITVNSENKDESQ 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00303 704 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 676 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr7g00303 704 Pfam Auxin response factor 256 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr7g00303 704 FunFam Auxin response factor 291 362 - -
Accr7g00303 704 Coils Coil 612 632 - -
Accr7g00303 704 Gene3D - 291 362 - -
Accr7g00303 704 Pfam AUX/IAA family 569 670 IPR033389 -
Accr7g00303 704 SUPERFAMILY DNA-binding pseudobarrel domain 120 259 IPR015300 -
Accr7g00303 704 MobiDBLite consensus disorder prediction 104 124 - -
Accr7g00303 704 FunFam Auxin response factor 583 676 - -
Accr7g00303 704 SUPERFAMILY CAD & PB1 domains 583 664 - -
Accr7g00303 704 Gene3D - 584 676 - -
Accr7g00303 704 Pfam B3 DNA binding domain 130 231 IPR003340 GO:0003677
Accr7g00303 704 Gene3D - 127 232 IPR015300 -
Accr7g00303 704 FunFam Auxin response factor 128 232 - -
Accr7g00303 704 MobiDBLite consensus disorder prediction 683 704 - -
Accr7g00303 704 SMART B3_2 130 232 IPR003340 GO:0003677
Accr7g00303 704 CDD B3_DNA 128 230 IPR003340 GO:0003677
Accr7g00303 704 MobiDBLite consensus disorder prediction 108 124 - -
Accr7g00303 704 ProSiteProfiles B3 DNA-binding domain profile. 130 232 IPR003340 GO:0003677
Accr7g00303 704 MobiDBLite consensus disorder prediction 566 593 - -
Accr7g00303 704 ProSiteProfiles PB1 domain profile. 588 671 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00303 Accr-Chr7 4042947 4047356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00303 16 675 B3 DNA Binding Superfamily AT4G23980 56.822 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr7g00303 AUX_IAA 8.9e-12 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00303 K14486 - gmx:100795763 952.584