Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00300 ATGGTGTGGAACGAAGACGAACGAGACATGGTGGCGGCGGTTCTGGGCGCTCGAGCTTTCGATTACTTGGTGAACCACTCTGTTTCGAATGAGAATCTGTTAATGGCCGTTGTCACCGACGGGAATCTCCAGAATAAGCTCTCGGATCTCGTGGAGTGTCCAAACGTATGCAATTTCAGCTGGAACTACGCCATTTTCTGGCAAATTTCTCAGTCAAAATCCGGCGAATGGGTCTTAGGTTGGGGCGATGGCTGTTGCAGAGAACCCCATGAAGGCGAAGAAGAAGAAGAAAGAGGAATCCTCAGCCTTCGCATGGAGGATGAAGTTCAACAAAGGATGAGGAAGAAAGTATTGCAGAAGCTTCACACAACCTTCGGTGGTTCTGAAGAAGACAATTACGTTTCTGGATTAGACCGAGTCACTGATACTGAGTTGTTCTTTCTCGCTTCTATGTATTTCTCTTTCCCTCGTGGCCATGGAGGTCCAGGTAAGTGTCTCGCGTCTGATAAACATTCATGGCTCACAGGTGCACAGAAATCTTCAGTTGATTACTGTGTGAGATCGTTTCTGGTTAAATCGGCGGGAATTCAGACTATAGTTTTGATCCCTACTGATATGGGTGTGGTGGAGTTGGGTTCTACGAAGATGGTGAAGGAGAATTTAGAATTGTTGCAGGCAATCAAATCGGAGTTCTCCATTGAATCTGCATTCCCAACGCCGAAATCGTCAATTCCAGCACCAGCTCCATCTCCTCCTCCGGTTCCGGTGCCGGTTGGGAAAAGAGATGACCTTACTATTTTTCCGGTTTTAACAGTTTCTGATAAAGTCGAAGCAGTTCCGAAAATTTTCGGGCAAAATTTGAACCAGACGAAGAGCCCGAACCCGGTTCGAACCGGCCAATTTAGAGAGAAACTTGCCATTAGGAAAATGGAGGATAGGCCATGGTTAGGAGGTCATCACTCCAATGGCGTTCATCATCATCCTCATCCTCATCCTCATCCTCGTAATGGTGTTCATCCTTCGAGCTGGACGACAGCTAACAATAATGGCGTAAGGCAAGCCAGCCCTGTTGAAACTTATGTTCCTAGATCGTCGCCGAAGAGCAATGTGCCGGTTCTGGACCTTAATGGTGTTAACAACAACTATAATCATCAGCCACAAAGGAAAGCGCCGATAATGCAGATTGATTTCTCAGGAGCTACTAATTCCAGGTCTGTTGTCACCGCCGTGAGACCAAATGGCGGCGGCGCCTGCGAATCCGAGCAATCTGATGCTGATGCTGCTGCTGCTGCTGCTGCTTCATTCAGGGAGGAGCTGCTGCCGGCCGTGGCGGGGGACGAGAGGCAGCCGAGGAAGCGGGGAAGAAAGCCGGCGAACGGCAGGGAAGAACCTTTGAACCACGTGGAAGCTGAGAGGCAGAGACGTGAGAAGCTGAACCAACGGTTCTATGCATTAAGAGCTGTGGTGCCTAATATATCCAAGATGGACAAAGCCTCTTTACTGGGAGACGCCATTGCTTACATCAATGAGCTTCAGGCAAAACTGAAAGCGATGGAATCTGAGAAAGAGATCAGACTCGGAGGAAGCAGCACTTCTTCTTCGAGGGATCCATCAACAGAACCCAACTATAACTCTGGTCAGTCACAGCAATCTCCTGCTCAAGTGGAAGTCCAAGCTCGTCATGATGAGGTGGTCGTGAGAGTGATCTCTCCGATCAACTCTCACCCAGTCTCACCGGTGATCAAAGCGTTAATGGAAGCACAAGTTAGCGTTGTTGATTCAAAACTTACCACTGCAGATGAAGCTGTGTTTCACACATTTGTGATCAAGCAGCCTCAAGGGCCTGATCAGCAGCTGACAAAGGACAAGTTGATTGCTACATTTTCCCGCCAATCCAATTCATTGACTGGCCAATTAACATAG 1923 0.4847 MVWNEDERDMVAAVLGARAFDYLVNHSVSNENLLMAVVTDGNLQNKLSDLVECPNVCNFSWNYAIFWQISQSKSGEWVLGWGDGCCREPHEGEEEEERGILSLRMEDEVQQRMRKKVLQKLHTTFGGSEEDNYVSGLDRVTDTELFFLASMYFSFPRGHGGPGKCLASDKHSWLTGAQKSSVDYCVRSFLVKSAGIQTIVLIPTDMGVVELGSTKMVKENLELLQAIKSEFSIESAFPTPKSSIPAPAPSPPPVPVPVGKRDDLTIFPVLTVSDKVEAVPKIFGQNLNQTKSPNPVRTGQFREKLAIRKMEDRPWLGGHHSNGVHHHPHPHPHPRNGVHPSSWTTANNNGVRQASPVETYVPRSSPKSNVPVLDLNGVNNNYNHQPQRKAPIMQIDFSGATNSRSVVTAVRPNGGGACESEQSDADAAAAAAASFREELLPAVAGDERQPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKAMESEKEIRLGGSSTSSSRDPSTEPNYNSGQSQQSPAQVEVQARHDEVVVRVISPINSHPVSPVIKALMEAQVSVVDSKLTTADEAVFHTFVIKQPQGPDQQLTKDKLIATFSRQSNSLTGQLT 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00300 640 MobiDBLite consensus disorder prediction 441 473 - -
Accr7g00300 640 MobiDBLite consensus disorder prediction 320 334 - -
Accr7g00300 640 MobiDBLite consensus disorder prediction 521 556 - -
Accr7g00300 640 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 465 526 IPR036638 GO:0046983
Accr7g00300 640 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 462 511 IPR011598 GO:0046983
Accr7g00300 640 Gene3D - 455 525 IPR036638 GO:0046983
Accr7g00300 640 PANTHER MYC 29 627 IPR045084 GO:0003700|GO:0006355
Accr7g00300 640 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 43 231 IPR025610 -
Accr7g00300 640 Coils Coil 501 521 - -
Accr7g00300 640 FunFam Transcription factor bHLH13 455 526 - -
Accr7g00300 640 SMART finulus 468 517 IPR011598 GO:0046983
Accr7g00300 640 MobiDBLite consensus disorder prediction 314 350 - -
Accr7g00300 640 Pfam Helix-loop-helix DNA-binding domain 466 512 IPR011598 GO:0046983
Accr7g00300 640 MobiDBLite consensus disorder prediction 525 556 - -
Accr7g00300 640 CDD bHLH_AtAIB_like 459 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00300 Accr-Chr7 3981944 3983866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00300 1 635 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 47.561 7.00e-178 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g00300 bHLH-MYC_N 4.9e-56 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00300 - - pcin:129291836 841.262