Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00299 ATGCTGAAGATTGAGGTAGGTCTTGGAGTCGGAGGAGATATGGTGTGGAACGAAGACGAACGAGACATGGTGGCGGCGGTTCTGGGCGCTCGAGCTTTCGATTACTTGGTGAACCACTCTGTTTCGAATGAGAATCTGTTAATGGCCGTTGTCACCGACGGGAATCTCCAGAATAAGCTCTCGGATCTCGTGGAGTGTCCAAACGTATGCAATTTCAGCTGGAACTACGCCATTTTCTGGCAAATTTCTCAGTCAAAATCCGGCGAATGGGTCTTAGGTTGGGGCGATGGCTGTTGCAGAGAACCCCATGAAGGCGAAGAAGAAGAAGAAAGAGGAATCCTCAGCCTTCGCATGGAGGATGAAGTTCAACAAAGGATGAGGAAGAAAGTATTGCAGAAGCTTCACACAACCTTCGGTGGTTCTGAAGAAGACAATTACGTTTCTGGATTAGACCGAGTCACTGATACTGAGTTGTTCTTTCTCGCTTCTATGTATTTCTCTTTCCCTCGTGGCCATGGAGGTCCAGGTAAGTGTCTCGCGTCTGATAAACATTCATGGCTCACAGGTGCACAGAAATCTTCAGTTGATTACTGTGTGAGATCGTTTCTGGTTAAATCGGCGGGAATTCAGACTATAGTTTTGATCCCTACTGATATGGGTGTGGTGGAGTTGGGTTCTACGAAGATGGTGAAGGAGAATTTAGAATTGTTGCAGGCAATCAAATCGGAGTTCTCCATTGAATCTGCATTCCCAACGCCGAAATCGTCAATTCCAGCACCAGCTCCATCTCCTCCTCCGGTTCCGGTGCCGGTTGGGAAAAGAGATGACCTTACTATTTTTCCGGTTTTAACAGTTTCTGATAAAGTCGAAGCAGTTCCGAAAATTTTCGGGCAAAATTTGAACCAGACGAAGAGCCCGAACCCGGTTCGAACCGGCCAATTTAGAGAGAAACTTGCCATTAGGAAAATGGAGGATAGGCCATGGTTAGGAGGTCATCACTCCAATGGCGTTCATCATCATCCTCATCCTCATCCTCATCCTCGTAATGGTGTTCATCCTTCGAGCTGGACGACAGCTAACAATAATGGCGTAAGGCAAGCCAGCCCTGTTGAAACTTATGTTCCTAGATCGTCGCCGAAGAGCAATGTGCCGGTTCTGGACCTTAATGGTGTTAACAACAACTATAATCATCAGCCACAAAGGAAAGCGCCGATAATGCAGATTGATTTCTCAGGAGCTACTAATTCCAGGTCTGTTGTCACCGCCGTGAGACCAAATGGCGGCGGCGCCTGCGAATCCGAGCAATCTGATGCTGATGCTGCTGCTGCTGCTGCTGCTTCATTCAGGGAGGAGCTGCTGCCGGCCGTGGCGGGGGACGAGAGGCAGCCGAGGAAGCGGGGAAGAAAGCCGGCGAACGGCAGGGAAGAACCTTTGAACCACGTGGAAGCTGAGAGGCAGAGACGTGAGAAGCTGAACCAACGGTTCTATGCATTAAGAGCTGTGGTGCCTAATATATCCAAGATGGACAAAGCCTCTTTACTGGGAGACGCCATTGCTTACATCAATGAGCTTCAGGCAAAACTGAAAGCGATGGAATCTGAGAAAGAGATCAGACTCGGAGGAAGCAGCACTTCTTCTTCGAGGGATCCATCAACAGAACCCAACTATAACTCTGGTCAGTCACAGCAATCTCCTGCTCAAGTGGAAGTCCAAGCTCGTCATGATGAGGTGGTCGTGAGAGTGATCTCTCCGATCAACTCTCACCCAGTCTCACCGGTGATCAAAGCGTTAATGGAAGCACAAGTTAGCGTTGTTGATTCAAAACTTACCACTGCAGATGAAGCTGTGTTTCACACATTTGTGATCAAGCAGCCTCAAGGGCCTGATCAGCAGCTGACAAAGGACAAGTTGATTGCTACATTTTCCCGCCAATCCAATTCATTGACTGGCCAATTAACATAG 1962 0.4847 MLKIEVGLGVGGDMVWNEDERDMVAAVLGARAFDYLVNHSVSNENLLMAVVTDGNLQNKLSDLVECPNVCNFSWNYAIFWQISQSKSGEWVLGWGDGCCREPHEGEEEEERGILSLRMEDEVQQRMRKKVLQKLHTTFGGSEEDNYVSGLDRVTDTELFFLASMYFSFPRGHGGPGKCLASDKHSWLTGAQKSSVDYCVRSFLVKSAGIQTIVLIPTDMGVVELGSTKMVKENLELLQAIKSEFSIESAFPTPKSSIPAPAPSPPPVPVPVGKRDDLTIFPVLTVSDKVEAVPKIFGQNLNQTKSPNPVRTGQFREKLAIRKMEDRPWLGGHHSNGVHHHPHPHPHPRNGVHPSSWTTANNNGVRQASPVETYVPRSSPKSNVPVLDLNGVNNNYNHQPQRKAPIMQIDFSGATNSRSVVTAVRPNGGGACESEQSDADAAAAAAASFREELLPAVAGDERQPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKAMESEKEIRLGGSSTSSSRDPSTEPNYNSGQSQQSPAQVEVQARHDEVVVRVISPINSHPVSPVIKALMEAQVSVVDSKLTTADEAVFHTFVIKQPQGPDQQLTKDKLIATFSRQSNSLTGQLT 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00299 653 MobiDBLite consensus disorder prediction 327 363 - -
Accr7g00299 653 MobiDBLite consensus disorder prediction 534 569 - -
Accr7g00299 653 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 56 244 IPR025610 -
Accr7g00299 653 Gene3D - 468 538 IPR036638 GO:0046983
Accr7g00299 653 MobiDBLite consensus disorder prediction 454 486 - -
Accr7g00299 653 Coils Coil 514 534 - -
Accr7g00299 653 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 478 539 IPR036638 GO:0046983
Accr7g00299 653 MobiDBLite consensus disorder prediction 333 347 - -
Accr7g00299 653 SMART finulus 481 530 IPR011598 GO:0046983
Accr7g00299 653 MobiDBLite consensus disorder prediction 538 569 - -
Accr7g00299 653 CDD bHLH_AtAIB_like 472 537 - -
Accr7g00299 653 FunFam Transcription factor bHLH13 468 539 - -
Accr7g00299 653 Pfam Helix-loop-helix DNA-binding domain 479 525 IPR011598 GO:0046983
Accr7g00299 653 MobiDBLite consensus disorder prediction 453 486 - -
Accr7g00299 653 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 475 524 IPR011598 GO:0046983
Accr7g00299 653 PANTHER MYC 42 640 IPR045084 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00299 Accr-Chr7 3981944 3983905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00299 12 648 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 47.568 1.32e-178 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr7g00299 bHLH-MYC_N 5.1e-56 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00299 - - pcin:129291836 848.195