Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00298 ATGTCATCAGCATTGGAAGACTCAACCGTGAAGCTAGAAAGTTTATCAGCATCGGGAGACTCAAGCTCAACTCTGGAGTTAGAGATTCCATCAGCATCAGAAGGCCCAGCCGTGAAGTTAGAAACAACTGACACAGAACAACTTGGTGAGAGCAGACACTGCTCTGCCTCCGGCAGAAATGTTGTGGAAAGAAATTGCTCTGTAGAAGGTGATGTTAGTACAATATCTGCTGAAGTTACAGATTATGCCAAGACTTTCGGACAGAAACATGAACTCACTCAATGTGCAAGTATCTTAACCTCTACTTTTAAGACCAATGTTAATGACAAAACGAGGACTGACATTCTTAACAATTTGTCTCATGGTCCAGGGTCCCCAAAATCAAAACATAGTCTGGTAAAAGATTCTGTAGAAACTAATCAAGAAGCTGAAGTTGTCCATGGTGGTGCTGTTTGGGATATCTTCCGTCGTCAAGATGTACCAAAGCTAATGGAGTATTTAAGGAAGCATAAGAAGGGATTCCGTCATATCCAAAATCATCCTGTTATACATCCCGTTCATTATCAGACATATTTCCTTAATGAGAAGCATAAGAAACAATTGAAACGGGAGTTTGGTGTTGAACCCTGGACTTTTCAGCAACATCTTGGTGAAGCTGTTTTCATTCCCGCTGGATGTCCCCATAAGTTAGAAATACTGAAATAG 705 0.4099 MSSALEDSTVKLESLSASGDSSSTLELEIPSASEGPAVKLETTDTEQLGESRHCSASGRNVVERNCSVEGDVSTISAEVTDYAKTFGQKHELTQCASILTSTFKTNVNDKTRTDILNNLSHGPGSPKSKHSLVKDSVETNQEAEVVHGGAVWDIFRRQDVPKLMEYLRKHKKGFRHIQNHPVIHPVHYQTYFLNEKHKKQLKREFGVEPWTFQQHLGEAVFIPAGCPHKLEILK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00298 234 ProSiteProfiles JmjC domain profile. 88 234 IPR003347 -
Accr7g00298 234 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 96 230 IPR045109 GO:0032454|GO:0033169
Accr7g00298 234 MobiDBLite consensus disorder prediction 1 52 - -
Accr7g00298 234 SMART cupin_9 91 234 IPR003347 -
Accr7g00298 234 MobiDBLite consensus disorder prediction 1 29 - -
Accr7g00298 234 Pfam JmjC domain, hydroxylase 148 228 IPR003347 -
Accr7g00298 234 SUPERFAMILY Clavaminate synthase-like 145 228 - -
Accr7g00298 234 Gene3D Cupin 74 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00298 Accr-Chr7 3960955 3961845 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Accr7g00298 JmjC 3.7e-10 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00298 K15601 - qsa:O6P43_027381 183.726