Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00281 ATGGAGGACCATATCGCCACCAATAAGGTCTACAATCTCTTCGTGAAGCTCTTGGACGGAAAAACCCTAACCCTAAAATTCCCATCTCCTACTCTTCACGCCAATTCCGTAAAGGATCGCATTTTCGATATTACCAGAATCCCCGCACAATACCAGCGCCTTGTTACTGGCGTCCAAGACCTTAACGGTAACGAATCTGTAATCTCCTGCTCACCGGAAGGCGGAGATGTGTTCCCCACCGTCCATCTGCTGCTGCGGCTCGCCGGTGGCAAGGGAGGGTTTGGATCGCTTTTGCGTGGTGCGGCCACCAAGGCTGGGCAGAAGAAGACGAACAACTTCGATGCTTGCAGAGATATGAGCGGCCGGAGGTTGAGGCACGTGAACGCGGAGAAGAGATTGGAGGAATGGAAGGCGGAGGAGGCGGAGAGGAAGCTGGAGAAGATTGCGGAAGAGTTTTTGAAGAAGCAAGCGAAGAAGGGCAAGAAGGGTGTGGGCGATGGCGAGGCGCACAAGTATGTGGCAAAATACAGGGAGGAGTCTGAGCGATGCGCTGCTGAGGTTGCCGAGTCGGTGAAGGAGGCTTTGATGTCTATAAATGGCAAGAGAAAGGTTTCAAATTTTAAAAAAGACGGAGCTGATGCAAAGAAGATGAAGATATGGATGGGAAAGAGGAAATTAAATGAAAGTGATAGTGATGATTCTGATGAGGATGGAAGTGAAGATGAAGCAGAAAATGAGAAATCAACTGTGTTAAATAATGAGAATGACTCAGACTCAAATAAGGCTGGAGGCAGTTCAGGTTCAGTAACTGGTGGGAAACAGGATGGTGACTCTTCTGTGGCAGGCTCAAGTGAAAGTTGCTCTGAAGAAGAGAAAGAGACTGTTCTAGAAGGAAAAATGGACTCCAGCAATTGTCTCAACATTGAATCTCTTCAGAACACTATGGGCAAATCGGTTGAACCTGTGACATGTGATAATATGGGAAATGGTGTCACTAACCCTGTTTTGGAGTCTGCAGCTTTGGGAATTGATGCTGAAGAAGAAGATGGAAAGAAGGACTCTAGTGAAGCTGACAAGCTTGATTCTGCAGCTGCTCAAGCCACAAATCTTATAAGCTCACAGCACGTGGTCGATGCAAGCAAATCAAATGATATTGAAACTGATGGATTGCACGAGGATAAAGCATCATCTCATGAAGAAACTCACTCAAGTGCCAGTGCTCAGGAAATAGATGAGCCTTTGAATTTTGAGGCATTTAATTCAGCTGCAGAACTTGAGGTGCTTGGCCTCGAGAGGTTGAAGTCCGAACTGCAGGAGCGCGGCTTAAAATGTGGAGGCACATTGCAGGAGCGTGCTGCCAGGCTTTTCCTTCTAAAATCAACTCCACTGGATAAACTTCCGAAAAAGCTGCTTGCCAAGAAATAA 1425 0.4709 MEDHIATNKVYNLFVKLLDGKTLTLKFPSPTLHANSVKDRIFDITRIPAQYQRLVTGVQDLNGNESVISCSPEGGDVFPTVHLLLRLAGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAEEAERKLEKIAEEFLKKQAKKGKKGVGDGEAHKYVAKYREESERCAAEVAESVKEALMSINGKRKVSNFKKDGADAKKMKIWMGKRKLNESDSDDSDEDGSEDEAENEKSTVLNNENDSDSNKAGGSSGSVTGGKQDGDSSVAGSSESCSEEEKETVLEGKMDSSNCLNIESLQNTMGKSVEPVTCDNMGNGVTNPVLESAALGIDAEEEDGKKDSSEADKLDSAAAQATNLISSQHVVDASKSNDIETDGLHEDKASSHEETHSSASAQEIDEPLNFEAFNSAAELEVLGLERLKSELQERGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00281 474 Coils Coil 124 158 - -
Accr7g00281 474 MobiDBLite consensus disorder prediction 381 406 - -
Accr7g00281 474 Pfam Replication stress response SDE2 C-terminal 399 473 IPR025086 -
Accr7g00281 474 SUPERFAMILY Ubiquitin-like 10 91 IPR029071 -
Accr7g00281 474 MobiDBLite consensus disorder prediction 252 285 - -
Accr7g00281 474 Pfam Silencing defective 2 N-terminal ubiquitin domain 11 161 IPR024974 -
Accr7g00281 474 MobiDBLite consensus disorder prediction 361 380 - -
Accr7g00281 474 Gene3D - 3 92 - -
Accr7g00281 474 PANTHER SPLICING FACTOR SF3A-RELATED 12 473 - -
Accr7g00281 474 MobiDBLite consensus disorder prediction 223 303 - -
Accr7g00281 474 MobiDBLite consensus disorder prediction 338 411 - -
Accr7g00281 474 MobiDBLite consensus disorder prediction 344 359 - -
Accr7g00281 474 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00281 Accr-Chr7 3696687 3699262 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00281 414 473 C2H2 Transcription Factor Family AT5G06160 48.333 6.80e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00281 K25059 - gmx:100781694 462.996