Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00277 ATGAATTCAAAGGGTCCTAAATTTGTGAGGTTTGGTTATTCGATTTCAGAGCCATCATCTCCCACTGAGCAGAAAAATTCTAGTGATAATGGATATCAAGGAAGAAAACTGAGACGACGCGCAAGCGCTGTTTTAGATAATATCAAAAGAAGACTCGAGGATGGGTCTGATAAGATAAAAAACTTGAACAAATCCTCAACTGCTCATCCTATAAGCGATAGACAGCCCAAGACATCAACTCCTAGAAGAAAAATTCTTGACCCACAGGGGTCATTCCTTCAGAAATGGAACAAAATATTTGTAATCACATCAGTTATGGCTGTCTCTCTGGATCCACTGTTCTTCTATGTCCCAACGATTGTAGATTCAGACAAATGCCTTAAGTTGGATGGAAACTTGCGGATCATAGCTTCTGTTCTTCGTGCATTCTTTGATCTTTTCTACATTTATCACATAATCTTACAGTTTCGAACTGGGTTTATTGCTCCTTCTTCTCTCGTATTTGGAAGGGGCGAGCTGGTTGATGATCATTGGGCTATCATGAAAAGATACTTATCTTCATTCTTTATCATCGATGTTCTAGCCATTGTTCCACTCCCACAGGTGGTTATTTTATTTATCATTCCAAAACTGGAGGCCTCATTTCCATATCTGGCGAAGGACTTGTTGATATATATGACCCTTATCCAGTATGTGCCAAGACTCTTGCGCATTTACCCATTATTCAAAGAAGTAAAAAGAACTTCTGGCATACTCACAGAGACACCATGGGCTGGAGCTGCTTATAATCTTTTTCTGTATATGCTGGCAAGTCATTTGGTTGGAGCTTTTTGGTACCTGCTTTCGGTAGAATCAGGGGTTCGGTGCTGGCACGGAGCATTAAAAAATACAGGATATGATGATAATAACTATCTGATCTGTGGTAAACAGAATGAAACTGTTGTTTCACTTCTCACTAACGCATGTGCTGTTGTTGATCCTTCTCAAAATACCAACTCAACAAACTTCAATTTTGGAATATATGCGGATGCTTTGCAATCTGGTATGGTTGATTCAACAACAGATTTTCCTCATAAGTTCTTCTACTGCTTCTGGTGGGGTTTCCGCAATTTAAGTTCTCTTGGACAGAACCTTGCGACAAGTACTTATATCGGGGAGATAATCTTTGCTTTCTGGATTGCCGTCTTTGGATTAGTTCTGTTCTCTTTTCTTATTGGAAACATGCAGACATATCTGCAATCTATAACTGTTAGAGTTGAGGAGATGAGAGTCAAAAGGAGAGATGCAGAGCGATGGATGGCCCACCGTATGCTTCCCCAGAACCTAAAGGAAAGAATTAGACGGTATGAACAATACAAGTGGCAAGAAAATCGGGGTGTCGAAGAAGAAGCATTAATCCACAACCTTCCTAAAGATCTCAGAAGAGATATAAAGCGTCATCTTTGCTTGGATTTACTTAAAAAAGTTCCACTGTTTGAGAAAATGGATGAACAATTGTTGGATGCAGTTTCTGATAGATTGAAGCCAGTTCTTTATATAGAGAAGACTTACATTGTTCGTGAAGGTGACCCAGTCGATGAAATGCTCTTCATTATGCGAGGAAACCTTGCGACTATGACAACATATGGAGGAAGAACTGGTTTTTTTAACTCCTCAGTTCTTCAAGCCGGTGACTTCTGTGGTGAAGAGCTTCTAACATGGGCCTTGGACCCCAATTCCTCTTCAAGTCTTCCCATTTCAACAAGAACAGTGGAATCTATATCAGAAGTTGAAGCTTTTGCTCTCATGCCTGATGACTTGAACTTTGTTACTTCCCAATTCCGAAGACTTCATAGCAAACAACTTCAGCACACTTTCAGGTTTTGTTCGGTGCAGTGGAGGACATGGGCTGCATGTTTCATACAAGCAGCATGGCGTCGTTACCGCAGGAAGAAGGTAGAGAGGTCATTACGTGAAGCTGAAGAAAGACTGAAAAATGCTTTGACCAATGAGAATGGATCATCATCATCATCAACGGCAACACCATTTCTTGGTGCTTCCATTTATGCTTCAAGGTTCGTACGAAACATGCGACAAAACAACCAACACATGACACATAGATTGTTGCCTCCGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACTTCTCAAACTCACTAG 2160 0.4074 MNSKGPKFVRFGYSISEPSSPTEQKNSSDNGYQGRKLRRRASAVLDNIKRRLEDGSDKIKNLNKSSTAHPISDRQPKTSTPRRKILDPQGSFLQKWNKIFVITSVMAVSLDPLFFYVPTIVDSDKCLKLDGNLRIIASVLRAFFDLFYIYHIILQFRTGFIAPSSLVFGRGELVDDHWAIMKRYLSSFFIIDVLAIVPLPQVVILFIIPKLEASFPYLAKDLLIYMTLIQYVPRLLRIYPLFKEVKRTSGILTETPWAGAAYNLFLYMLASHLVGAFWYLLSVESGVRCWHGALKNTGYDDNNYLICGKQNETVVSLLTNACAVVDPSQNTNSTNFNFGIYADALQSGMVDSTTDFPHKFFYCFWWGFRNLSSLGQNLATSTYIGEIIFAFWIAVFGLVLFSFLIGNMQTYLQSITVRVEEMRVKRRDAERWMAHRMLPQNLKERIRRYEQYKWQENRGVEEEALIHNLPKDLRRDIKRHLCLDLLKKVPLFEKMDEQLLDAVSDRLKPVLYIEKTYIVREGDPVDEMLFIMRGNLATMTTYGGRTGFFNSSVLQAGDFCGEELLTWALDPNSSSSLPISTRTVESISEVEAFALMPDDLNFVTSQFRRLHSKQLQHTFRFCSVQWRTWAACFIQAAWRRYRRKKVERSLREAEERLKNALTNENGSSSSSTATPFLGASIYASRFVRNMRQNNQHMTHRLLPPLPQKPSEPDFTSQTH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00277 719 SUPERFAMILY Voltage-gated potassium channels 87 413 - -
Accr7g00277 719 SUPERFAMILY cAMP-binding domain-like 420 613 IPR018490 -
Accr7g00277 719 Gene3D - 99 417 - -
Accr7g00277 719 MobiDBLite consensus disorder prediction 61 75 - -
Accr7g00277 719 Coils Coil 45 65 - -
Accr7g00277 719 Gene3D Helix hairpin bin 418 482 - -
Accr7g00277 719 SMART cnmp_10 491 622 IPR000595 -
Accr7g00277 719 MobiDBLite consensus disorder prediction 59 84 - -
Accr7g00277 719 Pfam Ion transport protein 96 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr7g00277 719 FunFam Cyclic nucleotide-gated ion channel 1 489 607 - -
Accr7g00277 719 ProSiteProfiles cAMP/cGMP binding motif profile. 491 575 IPR000595 -
Accr7g00277 719 MobiDBLite consensus disorder prediction 1 41 - -
Accr7g00277 719 MobiDBLite consensus disorder prediction 698 719 - -
Accr7g00277 719 Gene3D Jelly Rolls 489 609 IPR014710 -
Accr7g00277 719 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 60 714 - -
Accr7g00277 719 MobiDBLite consensus disorder prediction 15 31 - -
Accr7g00277 719 Coils Coil 643 663 - -
Accr7g00277 719 CDD CAP_ED 491 621 IPR000595 -
Accr7g00277 719 FunFam Cyclic nucleotide-gated ion channel 1 418 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00277 Accr-Chr7 3659060 3663598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00277 1 716 Ion Channels AT5G53130 61.931 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00277 K05391 - gmx:100797784 988.023