Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00276 ATGAATTCAAAGCGACAAAAATTTGTGAGGTTTGATGGTTGGAGTTCAGAGGCATCATCTACTACTGAGGAGAAAAATTCTAACGATAATGGATATCATGGAAGAAAACTGAGGCCAAGCGTAAGCGCTGTTTTAGACAGTATCAAAAGAAGACTTGAGGATGGGTCTGATAAGATAAAAAACTTGCGAAAATCCTCAACTGTTCATCCTATAAGTGATAGACCGCCCAAGACATTGGCTCCTGAAAAAAAAATTCTTGATCCACAGGGGTCGTTCCTTCAGAAATGGAACAAAATATTTGTAATCACATCTGTTTTGGCTGTCTCTGTGGATCCACTGTTCTTTTACATCCCAGCAATTGGAGGGACTGGCGAATGCCTTACGTTGAATCGAAACTTGCAGATTATTGCTTCTGTTCTCCGCACATTCTTTGATCTTTTCTACATCCTTCACATAATCTTACAGTTTCGAACTGGATTTATTGCTCCTTCTTCTCGCGTATTTGGAAGGGGCGAGCTCGTTAACGATCATTGGGCTATCATGAAAAGATACTTATCTTCATCCTTTATCATCGATGTTTTGTCTATTGTTCCACTTCCACAGGTGGTTATTTTATTTATCTTTCCAAAACTGGTGGACTCAGTTCCATTTCTGGCGAAGGACTTGTTGACATATATGATCATGATCCAGTATGTGCCAAGACTCTTGCGCATTTACCCATTATTCAAAGAAGTAACAAGAACTTCTGGCATACTCACGGAGACACCATGGGCTGGAGCTGCTTATAATCTTTTTCTGTATATGCTGGCAAGTCATTTGGTTGGAGCTTTTTGGTACCTGCTTTCGATAGAATCAAGGGTTCGGTGCTGGCACGAGGCATTCAGACTCAGAAGTACAGGATATGATGACAAGAATCTGATCTGTGGTAGACAGAATGAAAACGTCGTTTCACTTCTCACTGACGCATGTGCTGTTGTTGATCCTTCTCAAATTACCAACTCAACACAATTCAATTTTGGAATATATGCGGATGCTCTGCAATCTGGTGTGGTTAATTCAACAACAGATTTTCCTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTCTTGGACAGAACCTTAAGACAAGCACTTATGTCGCGGAGATAATCTTTGCTATCTGGATCGCCGTCTTTGGATTAGTTCTGTTCTCTTTGCTTATTGGAAACATGCAGAAATATCTGCAATCTACAACTGTTAGAGTTGAGGAGATGAGAGTCAAAAGGAGAGATGCAGAGCAATGGATGGCCCACCGTATGCTTCCTGAGAACTTGAGGGAAAGAATTAGACGGTATGAACATTACAAATGGCAGCAAAACCGGGGTGTTGAAGAAGAAGCATTAATTCGCAACCTTCCTAAAGACCTCAGAAGGGACATAAAGCGTCATCTTTGCTTGGCTTTACTTAAGAAAGTGCCAATCTTTGAGAAAATGGACGAACAATTGTTGGATGCAATGGCTGATAGATTGAAGCCAATTCTTTATACGGAGAAGAGTTACATTGTTCGTGAAGGAGATCCAGTCGATGAAATGCTCTTCATCATTCGAGGAAAGCTCGCTACTATGACCACAAATGGAGGAAGAACTGGTTTCTTCAACTCCTCAGTTTTGCAAGCTGGTGACTTTTGTGGTGAAGAGCTTCTAACATGGGCCTTGGACCCCAATTCCTCTTCAAATCTTCCTATTTCAACAAGAACAGTGGAATCTATATCAGAAGTTGAAGCTTTTGCTCTCATGCCTGATGACTTGAAGTTTGTCACTTCCCAATTTCGAAGACTTCATAGCAAACAGCTTCAGCACACTTTCAGGTTTTATTCCTTGCAATGGAAGACTTGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTCGTTACAGTAGAAAGAAGGTAGAGAGGCAATTGCGTGAAGCAGAAGAAAGACTAAAAGATACTTTGACCAATGAGAATGGATCTTCATCATCATCAACACCAAGTCTTGGTTCCACCATTTATGCTTCAAGGTTCGCTGCCAACGCCTTACGAAACTTGCGACAACACAGGGAACAGAACAACAGATTGTCACCCAGATTGTTGCCTCTGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACCTCTCAAAGTCACTAG 2178 0.4164 MNSKRQKFVRFDGWSSEASSTTEEKNSNDNGYHGRKLRPSVSAVLDSIKRRLEDGSDKIKNLRKSSTVHPISDRPPKTLAPEKKILDPQGSFLQKWNKIFVITSVLAVSVDPLFFYIPAIGGTGECLTLNRNLQIIASVLRTFFDLFYILHIILQFRTGFIAPSSRVFGRGELVNDHWAIMKRYLSSSFIIDVLSIVPLPQVVILFIFPKLVDSVPFLAKDLLTYMIMIQYVPRLLRIYPLFKEVTRTSGILTETPWAGAAYNLFLYMLASHLVGAFWYLLSIESRVRCWHEAFRLRSTGYDDKNLICGRQNENVVSLLTDACAVVDPSQITNSTQFNFGIYADALQSGVVNSTTDFPQKFFYCFWWGLRNLSSLGQNLKTSTYVAEIIFAIWIAVFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMAHRMLPENLRERIRRYEHYKWQQNRGVEEEALIRNLPKDLRRDIKRHLCLALLKKVPIFEKMDEQLLDAMADRLKPILYTEKSYIVREGDPVDEMLFIIRGKLATMTTNGGRTGFFNSSVLQAGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFALMPDDLKFVTSQFRRLHSKQLQHTFRFYSLQWKTWGACFIQAAWRRYSRKKVERQLREAEERLKDTLTNENGSSSSSTPSLGSTIYASRFAANALRNLRQHREQNNRLSPRLLPLLPQKPSEPDFTSQSH 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00276 725 Coils Coil 644 664 - -
Accr7g00276 725 CDD CAP_ED 492 623 IPR000595 -
Accr7g00276 725 Gene3D Jelly Rolls 490 610 IPR014710 -
Accr7g00276 725 MobiDBLite consensus disorder prediction 13 27 - -
Accr7g00276 725 FunFam Cyclic nucleotide-gated ion channel 1 419 483 - -
Accr7g00276 725 Coils Coil 45 65 - -
Accr7g00276 725 ProSiteProfiles cAMP/cGMP binding motif profile. 492 576 IPR000595 -
Accr7g00276 725 FunFam Cyclic nucleotide-gated ion channel 1 490 608 - -
Accr7g00276 725 Pfam Cyclic nucleotide-binding domain 513 601 IPR000595 -
Accr7g00276 725 SUPERFAMILY Voltage-gated potassium channels 87 414 - -
Accr7g00276 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 60 720 - -
Accr7g00276 725 Gene3D - 99 416 - -
Accr7g00276 725 SMART cnmp_10 492 623 IPR000595 -
Accr7g00276 725 MobiDBLite consensus disorder prediction 1 38 - -
Accr7g00276 725 Pfam Ion transport protein 96 420 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr7g00276 725 Gene3D Helix hairpin bin 419 483 - -
Accr7g00276 725 SUPERFAMILY cAMP-binding domain-like 421 615 IPR018490 -
Accr7g00276 725 MobiDBLite consensus disorder prediction 701 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00276 Accr-Chr7 3636771 3641053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00276 1 722 Ion Channels AT5G53130 63.361 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00276 K05391 - gmx:100797784 1051.58