Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00272 ATGCCCGCAAAACTCTTATCGCAACTCCATCTTATCCAAGTTTCTTCCTTTTCTCGTTTCCCTTCCATGAAGCTCGGACCCTCCATTCAAACGTCCCGGGCAGTCCCCATTTTCTCTCGCGTTTTCCCCTTTAGGCTCAAGTACCTGGGTTTGAAGTCTCATTCTTTGCGGAATGAACTCTTCGGTGTGCGGCGATTCTCGACTCGGTCGTTCCCTGGGAGGGCTGGACCGAGGTCCGAGATCAACCGGGGAAATCGGGATAAAGAAAGGGTCATGGTTTCTAAGAGCTTGATGGAGGATGAGGCTGAACTCAGTGACTGGATTGACGATTTGAAGACCAACTCTTATCGAGGCCGACTCACCAGCGAAGAGGATGACTCGGATAGGGAGATGGGCCGCAATGGAGGGAGGATTAGAGCATCTGGGTCGATGAAAGGGGGCAGGGAGAGTGGCTCGAACAGATTTGGTGAATCAACTCGGAGGAAAACCCGGGATTCATTTGAGTCGTTTTCACGGAATTCTCGGAGGAGCCCGAGATTTGAAGACAACGACGATAAGGAAGGAAATGAATTCCGGTCTCCGAGAGGCGGTAGAGTGTCCGAAGGTCGAAATGAAAAGTCTCTCTTGGGGAAGAGAAGTGGCGAGGAGTTCCGAAGGGGAAGAAGGGACGGAAGGAGGCAATTGAATTCGATGAGTGACGATGATGCTGAGGAAGATGAACAAGGGGCAAAGAAGTTCATCGGCCGCTTTGGAGATCTTATTAGTGAGCAAGACAGTGACGATGAAGATACTGCGGATGAATATGGTGATGATGATTTACTGAAGAAGACGTTAGATTCTCGGCTGGGTAGAGAAATGGAGCTGAAGAAGAGTAGTCCAACAAGAGGTTCTCCTGAGAGATCTGACAGTTATTTAAGTGAGACCAAGTTTGATCAATGTTCAATCTCGCCTCTATCCTTGAAAGGAGTCAAGGATGCTGGATATGAGAAAATGACTGTTGTGCAGGAGGCAACTCTTCCAGTAATTCTCAGAGGTAAGGATGTCCTAGCCAAGGCTAAAACAGGCACCGGGAAAACTGTTGCCTTTTTGCTTCCATCTATTGAAGTTGTTGCAAAGTCACCTCCATTTGATCGTGATCTAAAGCGACCTCCAATCCTTGTGCTTGTCATATGCCCCACTCGAGAGCTTGCAAATCAAGCTGCTGCAGAAGCCACTAAACTACTGAAGTACCACCCTTCAATTGGTGTTCAAGCTGTGATTGGAGGGACAAGACTTGCTTTGGAACAGAAACGCATGCAAGCTAACCCTTGCCAGATCCTTGTTGCTACTCCTGGAAGGCTCAAGGACCATATTGAGAATACAGCAGGCCTTGCAACTCGGCTGAGGGGTGTGCAAGTCCTTGTGCTTGATGAAGCTGATCATTTACTAGACATGGGATTTCGCAAAGACATTGAGAGGATAATTGCTGCAGTTCCTAAACAAAGACAAACACTCTTATTTTCTGCCACCGTTTCAGAAGAGGTCCGTCAAGTCTGCCATATTGCATTGAAAAGGGATCATGAATTTATCAATACTGTTGAAGAGGGTAGTGAGGAGACACATTCACAGGTTCAGCAGATGCATTTAGTTGCACCATTAGCCAAACATTTCTCCTTGCTCTACGTTCTTCTAAAGGAGCATATTGCGGATAATGTTGACTATAAGGTTCTTGTTTTCTGCACAACTGCCATGGTCACAAGACTTGTTGCTGACTTTTGTGGTGAGTTGAACTTGAACGTGAGAGAAATTCATTCAAGAAAGCCTCAGAGCTATAGAACGAGGGTCTCTGAGGAGTTTCGGAAGTCAAAGGGCCTAATCCTTGTAACTTCGGATGTATCTGCTCGTGGAGTTGATTATCCAGATGTTACCCTGGTTATACAGTTGGGTTTGCCGGCGGAGAGAGAGCAGTATATCCACCGACTGGGTCGAACAGGGCGGAAAGGTAAAGCAGGGCGAGGCATATTATTACTGGCTCCTTGGGAAGAATTCTTTTTATCTACCGTAAAGGATTTACCTATCACAAAAGCACCAGTACCTTCAGTTGATCCTGACACACAGAAAAAGGTGGGAAGGGCCCTATCCCATGTTGAGATGAAGCACAAAGAAGCAGCATATCAGGCATGGCTTGGTTACTATAATTCCAACAAGAAAGTGGGGAGAGACAAGCAAAGGCTAGTGGAGCTTGCTAATGAATTCAGCAGAACCATGGGGCTTGATAACCCTCCAGCTATTCCAAAGCTAGTTCTTGGCAAGATGGGCCTCAGAAACATACCTGGTTTACGTTCCAAATAG 2331 0.4685 MPAKLLSQLHLIQVSSFSRFPSMKLGPSIQTSRAVPIFSRVFPFRLKYLGLKSHSLRNELFGVRRFSTRSFPGRAGPRSEINRGNRDKERVMVSKSLMEDEAELSDWIDDLKTNSYRGRLTSEEDDSDREMGRNGGRIRASGSMKGGRESGSNRFGESTRRKTRDSFESFSRNSRRSPRFEDNDDKEGNEFRSPRGGRVSEGRNEKSLLGKRSGEEFRRGRRDGRRQLNSMSDDDAEEDEQGAKKFIGRFGDLISEQDSDDEDTADEYGDDDLLKKTLDSRLGREMELKKSSPTRGSPERSDSYLSETKFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILRGKDVLAKAKTGTGKTVAFLLPSIEVVAKSPPFDRDLKRPPILVLVICPTRELANQAAAEATKLLKYHPSIGVQAVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTAGLATRLRGVQVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATVSEEVRQVCHIALKRDHEFINTVEEGSEETHSQVQQMHLVAPLAKHFSLLYVLLKEHIADNVDYKVLVFCTTAMVTRLVADFCGELNLNVREIHSRKPQSYRTRVSEEFRKSKGLILVTSDVSARGVDYPDVTLVIQLGLPAEREQYIHRLGRTGRKGKAGRGILLLAPWEEFFLSTVKDLPITKAPVPSVDPDTQKKVGRALSHVEMKHKEAAYQAWLGYYNSNKKVGRDKQRLVELANEFSRTMGLDNPPAIPKLVLGKMGLRNIPGLRSK 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00272 776 SMART helicmild6 580 661 IPR001650 -
Accr7g00272 776 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 556 703 IPR001650 -
Accr7g00272 776 Pfam DEAD/DEAH box helicase 333 510 IPR011545 GO:0003676|GO:0005524
Accr7g00272 776 Gene3D - 275 523 IPR027417 -
Accr7g00272 776 CDD SF2_C_DEAD 537 670 - -
Accr7g00272 776 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 308 336 IPR014014 GO:0003724
Accr7g00272 776 MobiDBLite consensus disorder prediction 119 272 - -
Accr7g00272 776 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 339 522 IPR014001 -
Accr7g00272 776 SMART ultradead3 327 540 IPR014001 -
Accr7g00272 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 677 IPR027417 -
Accr7g00272 776 Pfam Helicase conserved C-terminal domain 556 661 IPR001650 -
Accr7g00272 776 PANTHER RNA HELICASE 269 708 - -
Accr7g00272 776 MobiDBLite consensus disorder prediction 154 246 - -
Accr7g00272 776 CDD DEADc_MSS116 315 524 - -
Accr7g00272 776 Gene3D - 531 753 IPR027417 -
Accr7g00272 776 MobiDBLite consensus disorder prediction 284 306 - -
Accr7g00272 776 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00272 Accr-Chr7 3594714 3599579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00272 299 689 Eukaryotic Initiation Factors Gene Family AT3G19760 28.010 2.82e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00272 - - qsa:O6P43_027365 1057.36