Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00268 ATGAAGCTCGGACCCTCCTTTCAAACGTCCCGGGCAGTCCCCATTTTCTCTCGCGTTTTCCCCTTCAGGCTCAAGTACCTGGGGTTAAAGTCTCATTCTGTACGGAATGAACTCTTCGGTGTGCGGCGATTCTCGACTCGGTCGTTCCCTGGGAGGGCTGGACCGAGGTCCGAGATCAACCGGGGGAATCGGGATACTGAAAGGGTCAGGGTTTCTAAGAGCTTGATTGAGGATGAGGCTGAACTCAGTAACTGGATTGACGATTTGAAGACCGATTCTTATCGAGGCCGACTCACCAGCGAAGAGGATGACTCGGATAGGGAGATGGGCCGCAATGGAGGGAGGATTAGAGCATCTGGGTCTATGAAAGGGAGCAGGGAGAGTGGCTCGAACAGATTTGGTGAATCAACTCGGAGGAGAACCCAGGATTCATTTGAGTTGTTTTCACGGAATTCTCGTGTGAGCCCGAGATTTGAAGGCAATGACGATGAGGAGGGAAATGAATTCCGGTCTCCGAGAGGAGGTAGAGTGTCCGAAGGTCGGAATGTGAAGTCTCTCTTGGGGAAGAGAAGTGGTGAGGAGTTCCGAAGAGGAAGAAGGGATGGAAAGGGAAAATGGTATTCGTTGAGTGAGGATGATGCTGATGAAGATGAACAAGAGGCAAAGAAGTTCATGGGCCGCTTTGGAGATCTTATTAGTGAAGAAGATAGTGACGATGAAGATACTGCGGATGAATATGGTGATGATGATTTACTGAATAAGACGTTAGATTCTCGGCTGGGTCGAGAAATGGAGCTGAAGAAGAGCAGTCCAACAAGAGGTTCTCCTGATAGATCTGACAGTTATTTAAGTGAGACCAGATTTGATCAATGTTCAATCTCACCTCTATCCTTGAAAGGAGTCAAGGATGCTGGATATGAGAAAATGACTGTTGTGCAGGAGGCAACTCTTCCAGTAATTCTCAGAGGTAAGGATGTCCTAGCCAAGGCTAAAACAGGCACCGGAAAAACTGTTGCCTTTATGCTTCCATCTATCGAAGTTGCTGCAAAGTCACCTCCATTTGATCGTGATCTAAAGCGACCTCCAATCCTTGTGCTTGTCATATGCCCAACTCGAGAGCTTGCAAATCAAGCTGCTGCAGAAGCCACTAAACTACTGAAGTACCACCCTTCCATTGGTGTTCAAGTTGTGATTGGAGGGACAAGACTTGCTTTGGAACAGAAACGCATGCAAGCTAACCCTTGCCAGATCCTTGTTGCTACTCCTGGAAGGCTTAAGGACCATATTGAGAATACAGCAGGCCTTGCAACTCGGCTGAGGGGTTTGCAAGTCCTTGTGCTTGATGAAGCTGATCATTTGCTAGACATGGGATTTCGCAAAGACATTGAGAGGATAATCGCTGCAGTTCCTAAACAAAGACAAACTCTCTTATTTTCTGCCACCGTTTCAGAAGAGGTCCGTCAAGTCTGCCATATTGCATTGAAAAGGGATCATGAATTTATCAATACTGTTGAAGAGGGTAGTGAGGAGACACATTCACAGGTTCAGCAGATGCATTTAGTTGCACCATTAGCCAAACATTTCTCCTTGCTCTACGTTCTTCTCAAGGATCACATTGCAGATGATGTTGACTATAAGGTTCTTGTTTTCTGCACAACTGCCATGGTAACAAGACTTGTTGCTGACGTTTGTGGTGAGTTGAACTTGAACGTGAGAGAAATTCATTCAAGAAAGCCTCAGAGCTATAGAACGAGGATCTCTGAGGAGTTTCGGAAGTCAAAGGGCCTAATCCTTGTAACTTCAGATGTATCTGCTCGTGGAGTTGATTATCCAGATGTTACCCTGGTTATACAGTTGGGTTTGCCGGCGGACAGAGAACAGTATATCCACCGACTGGGTCGAACAGGGCGGAAAGGTAAAGCAGGGCGAGGCATATTATTACTGGCTCCTTGGGAAGAATTCTTTTTATCTACCGTAAAGGATTTACCTATCACAAAAGCACCAGTACCTTCAGTTGATCCTGACACACAGAAAAAGGTGGAAAGGGCCCTATCCCATGTTGAGATGAAGCACAAAGAAGCAGCATATCAGGCATGGCTTGGTTACTATAATTCCAACAAGAAAGTGGGGAGAGACAAGCAAAGGCTAGTGGAGCTTGCTAATGAATTCAGTAGAACCATGGGGCTTGATAACCCTCCAGCTATTCCAAAGCTAGTTCTTGGCAAGATGGGCCTCAGAAATATACCTGGTTTACGTTCCAAGTAG 2265 0.464 MKLGPSFQTSRAVPIFSRVFPFRLKYLGLKSHSVRNELFGVRRFSTRSFPGRAGPRSEINRGNRDTERVRVSKSLIEDEAELSNWIDDLKTDSYRGRLTSEEDDSDREMGRNGGRIRASGSMKGSRESGSNRFGESTRRRTQDSFELFSRNSRVSPRFEGNDDEEGNEFRSPRGGRVSEGRNVKSLLGKRSGEEFRRGRRDGKGKWYSLSEDDADEDEQEAKKFMGRFGDLISEEDSDDEDTADEYGDDDLLNKTLDSRLGREMELKKSSPTRGSPDRSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILRGKDVLAKAKTGTGKTVAFMLPSIEVAAKSPPFDRDLKRPPILVLVICPTRELANQAAAEATKLLKYHPSIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTAGLATRLRGLQVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATVSEEVRQVCHIALKRDHEFINTVEEGSEETHSQVQQMHLVAPLAKHFSLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVADVCGELNLNVREIHSRKPQSYRTRISEEFRKSKGLILVTSDVSARGVDYPDVTLVIQLGLPADREQYIHRLGRTGRKGKAGRGILLLAPWEEFFLSTVKDLPITKAPVPSVDPDTQKKVERALSHVEMKHKEAAYQAWLGYYNSNKKVGRDKQRLVELANEFSRTMGLDNPPAIPKLVLGKMGLRNIPGLRSK 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00268 754 SMART helicmild6 558 639 IPR001650 -
Accr7g00268 754 MobiDBLite consensus disorder prediction 97 113 - -
Accr7g00268 754 MobiDBLite consensus disorder prediction 97 283 - -
Accr7g00268 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 213 478 IPR027417 -
Accr7g00268 754 MobiDBLite consensus disorder prediction 248 283 - -
Accr7g00268 754 Gene3D - 253 501 IPR027417 -
Accr7g00268 754 Pfam DEAD/DEAH box helicase 311 488 IPR011545 GO:0003676|GO:0005524
Accr7g00268 754 Gene3D - 509 731 IPR027417 -
Accr7g00268 754 Pfam Helicase conserved C-terminal domain 534 639 IPR001650 -
Accr7g00268 754 CDD DEADc_MSS116 293 502 - -
Accr7g00268 754 MobiDBLite consensus disorder prediction 233 247 - -
Accr7g00268 754 MobiDBLite consensus disorder prediction 186 210 - -
Accr7g00268 754 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 286 314 IPR014014 GO:0003724
Accr7g00268 754 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 534 681 IPR001650 -
Accr7g00268 754 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 317 500 IPR014001 -
Accr7g00268 754 MobiDBLite consensus disorder prediction 132 146 - -
Accr7g00268 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 655 IPR027417 -
Accr7g00268 754 MobiDBLite consensus disorder prediction 156 177 - -
Accr7g00268 754 CDD SF2_C_DEAD 515 648 - -
Accr7g00268 754 SMART ultradead3 305 518 IPR014001 -
Accr7g00268 754 PANTHER RNA HELICASE 243 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00268 Accr-Chr7 3575012 3579801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00268 286 667 Eukaryotic Initiation Factors Gene Family AT3G19760 27.889 4.22e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00268 - - qsa:O6P43_027365 1043.11