Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00267 ATGGTCATGCCCGCAAAACTCTTATCGCAACTCCATCTTATCCAAGTTTCTTCCTTCTCCCGTCTCCCTTCCATGAAGCTCGGACCCTCCTTTCAAACGTCCCGGGCAGTCCCCATTTTCTCTCGCGTTTTCCCCTTCAGGCTCAAGTACCTGGGGTTAAAGTCTCATTCTGTACGGAATGAACTCTTCGGTGTGCGGCGATTCTCGACTCGGTCGTTCCCTGGGAGGGCTGGACCGAGGTCCGAGATCAACCGGGGGAATCGGGATACTGAAAGGGTCAGGGTTTCTAAGAGCTTGATTGAGGATGAGGCTGAACTCAGTAACTGGATTGACGATTTGAAGACCGATTCTTATCGAGGCCGACTCACCAGCGAAGAGGATGACTCGGATAGGGAGATGGGCCGCAATGGAGGGAGGATTAGAGCATCTGGGTCTATGAAAGGGAGCAGGGAGAGTGGCTCGAACAGATTTGGTGAATCAACTCGGAGGAGAACCCAGGATTCATTTGAGTTGTTTTCACGGAATTCTCGTGTGAGCCCGAGATTTGAAGGCAATGACGATGAGGAGGGAAATGAATTCCGGTCTCCGAGAGGAGGTAGAGTGTCCGAAGGTCGGAATGTGAAGTCTCTCTTGGGGAAGAGAAGTGGTGAGGAGTTCCGAAGAGGAAGAAGGGATGGAAAGGGAAAATGGTATTCGTTGAGTGAGGATGATGCTGATGAAGATGAACAAGAGGCAAAGAAGTTCATGGGCCGCTTTGGAGATCTTATTAGTGAAGAAGATAGTGACGATGAAGATACTGCGGATGAATATGGTGATGATGATTTACTGAATAAGACGTTAGATTCTCGGCTGGGTCGAGAAATGGAGCTGAAGAAGAGCAGTCCAACAAGAGGTTCTCCTGATAGATCTGACAGTTATTTAAGTGAGACCAGATTTGATCAATGTTCAATCTCACCTCTATCCTTGAAAGGAGTCAAGGATGCTGGATATGAGAAAATGACTGTTGTGCAGGAGGCAACTCTTCCAGTAATTCTCAGAGGTAAGGATGTCCTAGCCAAGGCTAAAACAGGCACCGGAAAAACTGTTGCCTTTATGCTTCCATCTATCGAAGTTGCTGCAAAGTCACCTCCATTTGATCGTGATCTAAAGCGACCTCCAATCCTTGTGCTTGTCATATGCCCAACTCGAGAGCTTGCAAATCAAGCTGCTGCAGAAGCCACTAAACTACTGAAGTACCACCCTTCCATTGGTGTTCAAGTTGTGATTGGAGGGACAAGACTTGCTTTGGAACAGAAACGCATGCAAGCTAACCCTTGCCAGATCCTTGTTGCTACTCCTGGAAGGCTTAAGGACCATATTGAGAATACAGCAGGCCTTGCAACTCGGCTGAGGGGTTTGCAAGTCCTTGTGCTTGATGAAGCTGATCATTTGCTAGACATGGGATTTCGCAAAGACATTGAGAGGATAATCGCTGCAGTTCCTAAACAAAGACAAACTCTCTTATTTTCTGCCACCGTTTCAGAAGAGGTCCGTCAAGTCTGCCATATTGCATTGAAAAGGGATCATGAATTTATCAATACTGTTGAAGAGGGTAGTGAGGAGACACATTCACAGGTTCAGCAGATGCATTTAGTTGCACCATTAGCCAAACATTTCTCCTTGCTCTACGTTCTTCTCAAGGATCACATTGCAGATGATGTTGACTATAAGGTTCTTGTTTTCTGCACAACTGCCATGGTAACAAGACTTGTTGCTGACGTTTGTGGTGAGTTGAACTTGAACGTGAGAGAAATTCATTCAAGAAAGCCTCAGAGCTATAGAACGAGGATCTCTGAGGAGTTTCGGAAGTCAAAGGGCCTAATCCTTGTAACTTCAGATGTATCTGCTCGTGGAGTTGATTATCCAGATGTTACCCTGGTTATACAGTTGGGTTTGCCGGCGGACAGAGAACAGTATATCCACCGACTGGGTCGAACAGGGCGGAAAGGTAAAGCAGGGCGAGGCATATTATTACTGGCTCCTTGGGAAGAATTCTTTTTATCTACCGTAAAGGATTTACCTATCACAAAAGCACCAGTACCTTCAGTTGATCCTGACACACAGAAAAAGGTGGAAAGGGCCCTATCCCATGTTGAGATGAAGCACAAAGAAGCAGCATATCAGGCATGGCTTGGTTACTATAATTCCAACAAGAAAGTGGGGAGAGACAAGCAAAGGCTAGTGGAGCTTGCTAATGAATTCAGTAGAACCATGGGGCTTGATAACCCTCCAGCTATTCCAAAGCTAGTTCTTGGCAAGATGGGCCTCAGAAATATACCTGGTTTACGTTCCAAGGATAGTGATAGAATCTTTCACTGA 2358 0.4635 MVMPAKLLSQLHLIQVSSFSRLPSMKLGPSFQTSRAVPIFSRVFPFRLKYLGLKSHSVRNELFGVRRFSTRSFPGRAGPRSEINRGNRDTERVRVSKSLIEDEAELSNWIDDLKTDSYRGRLTSEEDDSDREMGRNGGRIRASGSMKGSRESGSNRFGESTRRRTQDSFELFSRNSRVSPRFEGNDDEEGNEFRSPRGGRVSEGRNVKSLLGKRSGEEFRRGRRDGKGKWYSLSEDDADEDEQEAKKFMGRFGDLISEEDSDDEDTADEYGDDDLLNKTLDSRLGREMELKKSSPTRGSPDRSDSYLSETRFDQCSISPLSLKGVKDAGYEKMTVVQEATLPVILRGKDVLAKAKTGTGKTVAFMLPSIEVAAKSPPFDRDLKRPPILVLVICPTRELANQAAAEATKLLKYHPSIGVQVVIGGTRLALEQKRMQANPCQILVATPGRLKDHIENTAGLATRLRGLQVLVLDEADHLLDMGFRKDIERIIAAVPKQRQTLLFSATVSEEVRQVCHIALKRDHEFINTVEEGSEETHSQVQQMHLVAPLAKHFSLLYVLLKDHIADDVDYKVLVFCTTAMVTRLVADVCGELNLNVREIHSRKPQSYRTRISEEFRKSKGLILVTSDVSARGVDYPDVTLVIQLGLPADREQYIHRLGRTGRKGKAGRGILLLAPWEEFFLSTVKDLPITKAPVPSVDPDTQKKVERALSHVEMKHKEAAYQAWLGYYNSNKKVGRDKQRLVELANEFSRTMGLDNPPAIPKLVLGKMGLRNIPGLRSKDSDRIFH 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00267 785 SMART helicmild6 582 663 IPR001650 -
Accr7g00267 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 502 IPR027417 -
Accr7g00267 785 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 558 705 IPR001650 -
Accr7g00267 785 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 341 524 IPR014001 -
Accr7g00267 785 MobiDBLite consensus disorder prediction 272 307 - -
Accr7g00267 785 CDD DEADc_MSS116 317 526 - -
Accr7g00267 785 MobiDBLite consensus disorder prediction 210 234 - -
Accr7g00267 785 MobiDBLite consensus disorder prediction 121 307 - -
Accr7g00267 785 MobiDBLite consensus disorder prediction 257 271 - -
Accr7g00267 785 MobiDBLite consensus disorder prediction 121 137 - -
Accr7g00267 785 Gene3D - 533 756 IPR027417 -
Accr7g00267 785 MobiDBLite consensus disorder prediction 156 170 - -
Accr7g00267 785 Pfam Helicase conserved C-terminal domain 558 663 IPR001650 -
Accr7g00267 785 Gene3D - 277 525 IPR027417 -
Accr7g00267 785 MobiDBLite consensus disorder prediction 180 201 - -
Accr7g00267 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 387 679 IPR027417 -
Accr7g00267 785 CDD SF2_C_DEAD 539 672 - -
Accr7g00267 785 Pfam DEAD/DEAH box helicase 335 512 IPR011545 GO:0003676|GO:0005524
Accr7g00267 785 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 310 338 IPR014014 GO:0003724
Accr7g00267 785 SMART ultradead3 329 542 IPR014001 -
Accr7g00267 785 PANTHER RNA HELICASE 268 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00267 Accr-Chr7 3573033 3579873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00267 310 691 Eukaryotic Initiation Factors Gene Family AT3G19760 27.889 3.39e-45 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00267 - - qsa:O6P43_027365 1060.06