Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00259 ATGGACGAATGTCGCAGAAAGCAAGAAAAGACTGAAAGGTCTAACTCTGAAGAGGTGAGCAGTATTGAGTGGGATTTCATAAACATGTCAGAGCAAGAAGAAGATCTCATTTACAGAATGTACAAACTGGTGGGAGACAGATGGAGTCTGATAGCTGGTAGGATTCCAGGTCGAAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACATTCCCAAATGTTCGCTTCCAGGAGGCAAAACCTCACCCAATATAAATCCTAA 264 0.4205 MDECRRKQEKTERSNSEEVSSIEWDFINMSEQEEDLIYRMYKLVGDRWSLIAGRIPGRKAEEIERFWIMRHSQMFASRRQNLTQYKS 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00259 87 SUPERFAMILY Homeodomain-like 30 68 IPR009057 -
Accr7g00259 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 28 73 - -
Accr7g00259 87 CDD SANT 28 67 IPR001005 -
Accr7g00259 87 FunFam MYB-like transcription factor 28 70 - -
Accr7g00259 87 Pfam Myb-like DNA-binding domain 29 68 IPR001005 -
Accr7g00259 87 Gene3D - 30 87 - -
Accr7g00259 87 SMART sant 25 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00259 Accr-Chr7 3420461 3422408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00259 29 84 MYB Transcription Factor Family AT5G52600 53.571 4.30e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr7g00259 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00259 K09422 - qsu:112022944 145.976