Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00258 ATGGACGAATGTCGCAGAAAGCAAGAAAAGACTGAAAGGTCTAACTCTGAAGGTCAAGAGGTGAGCAGTATTGAGTGGGATTTCATAAACATGTCAGAGCAAGAAGAAGATCTCATTTACAGAATGTACAAACTGGTGGGAGACAGATGGAGTCTGATAGCTGGTAGGATTCCAGGTCGAAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACATTCCCAAATGTTCGCTTCCAGGAGGCAAAACCTCACCCAATATAAATCCTAA 270 0.4222 MDECRRKQEKTERSNSEGQEVSSIEWDFINMSEQEEDLIYRMYKLVGDRWSLIAGRIPGRKAEEIERFWIMRHSQMFASRRQNLTQYKS 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00258 89 Gene3D - 32 89 - -
Accr7g00258 89 MobiDBLite consensus disorder prediction 1 21 - -
Accr7g00258 89 FunFam MYB-like transcription factor 30 72 - -
Accr7g00258 89 CDD SANT 30 69 IPR001005 -
Accr7g00258 89 Pfam Myb-like DNA-binding domain 31 70 IPR001005 -
Accr7g00258 89 SMART sant 27 75 IPR001005 -
Accr7g00258 89 SUPERFAMILY Homeodomain-like 32 70 IPR009057 -
Accr7g00258 89 MobiDBLite consensus disorder prediction 1 16 - -
Accr7g00258 89 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 30 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00258 Accr-Chr7 3420461 3422408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00258 31 86 MYB Transcription Factor Family AT5G52600 53.571 4.83e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr7g00258 Myb_DNA-binding 5.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00258 K09422 - qsu:112022944 140.969