Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00232 ATGAAAGAAACTAAGATAATCACAAACAAGTTTGTGAAATCGGAGTTTCTGGATGAAGCTCCGAGAGTTGTACGGATCAGTGTCACCGATCACTACGCCACTGACAACTCAAGCAGCGACGACGACGACGACGAATATGAGCACTTCCAAAACAGAATAATGAAGAGGTTCGTTCACGAAATCAGAATGGAGAAATGTTCCAATTCTCCGGCGAACAGTGAGGTTCACGGAGGGGGGACCAATAACTCTGTTTTGAAACAGAGGTCCCGCAGAAACAACTCCGGTGAGGTCCGACCCGTAAAATCCGAACAGGTGAACCCAAAGGTGAAGAAGTACCGCGGCGTTCGACTGCGGCCGTGGGGACGGTTTTCGGCGGAGATCAGAGATCCGGTGCGTGGGCAAAGGCTGTGGTTGGGCACTTTCGACACGGCGGAGGAGGCGGCGATGTCGTACGACAGAGCAGCTATTCGTATTAAAGGTGCTAATGCGACTACAAATATTCTCCAAGCACCACCTAAAATTGGCCAAGTTATTGAAGAATCGGAATCAAACTCAATGATGGTAAACAACATTGAGCTGTTCAAAGAGCCTCACGTGTCTTCTCCAACCTCTGTACTGAGATTCGAGTATTCTCTGGAAGTACACAAAACAGAGCCCAGAGAAGTAAAAGAAGAAGTAGAATCAGAGGCATATTTCCAAGACAGTAATTTGTGGTTCCCAGATTCTCAATTTTCTTGTCAGTATACAGAATATGATGAACCCCCTCTCCCAATGTTCTTCGACCACATCACTTCAAACGATAATTTGAATTTCAGAGGCAGTCCATTCCATCTGGAACAAGATTTTGAATCCTGTAAATGGGACATAGACAACTACTTTCAAGAACAAGGCAGTATAGAAAAATGA 906 0.4547 MKETKIITNKFVKSEFLDEAPRVVRISVTDHYATDNSSSDDDDDEYEHFQNRIMKRFVHEIRMEKCSNSPANSEVHGGGTNNSVLKQRSRRNNSGEVRPVKSEQVNPKVKKYRGVRLRPWGRFSAEIRDPVRGQRLWLGTFDTAEEAAMSYDRAAIRIKGANATTNILQAPPKIGQVIEESESNSMMVNNIELFKEPHVSSPTSVLRFEYSLEVHKTEPREVKEEVESEAYFQDSNLWFPDSQFSCQYTEYDEPPLPMFFDHITSNDNLNFRGSPFHLEQDFESCKWDIDNYFQEQGSIEK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00232 301 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Accr7g00232 301 PRINTS Ethylene responsive element binding protein signature 134 150 IPR001471 GO:0003700|GO:0006355
Accr7g00232 301 SUPERFAMILY DNA-binding domain 111 167 IPR016177 GO:0003677
Accr7g00232 301 Pfam AP2 domain 111 160 IPR001471 GO:0003700|GO:0006355
Accr7g00232 301 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 20 212 - -
Accr7g00232 301 FunFam Ethylene-responsive transcription factor 2 110 169 - -
Accr7g00232 301 MobiDBLite consensus disorder prediction 91 105 - -
Accr7g00232 301 CDD AP2 110 166 IPR001471 GO:0003700|GO:0006355
Accr7g00232 301 MobiDBLite consensus disorder prediction 67 90 - -
Accr7g00232 301 Gene3D AP2/ERF domain 110 168 IPR036955 GO:0003700|GO:0006355
Accr7g00232 301 SMART rav1_2 111 174 IPR001471 GO:0003700|GO:0006355
Accr7g00232 301 ProSiteProfiles AP2/ERF domain profile. 111 168 IPR001471 GO:0003700|GO:0006355
Accr7g00232 301 MobiDBLite consensus disorder prediction 67 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00232 Accr-Chr7 2977420 2978325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00232 1 296 AP2-EREBP Transcription Factor Family AT2G46310 38.188 3.66e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g00232 AP2 3.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00232 - - pcin:129290903 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00232 7 2977420 2978325 Accr7g00232 7 2977420 2978325 ECH