Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00208 ATGTCCTCCTCCTCCGCCGCTGCCACCTCCTTCCTCTCCAACATCGGCCTCGGCTACTCCATCGCTATCGCCCTCGCCTTTCTCTTCCTCCTCTCCACTCTCCTCCTCTCTTCCTACCTCTGCTGCCGCCCTGACCCTCCCCCTCCTCCCGCCGCCGCCACCGACGGCATCATTCTTCCCCGCATCGTCTTCGTCGCTGACGACGATCACCACCACAACCGCGATGATAACCCCATCTCATCCCTCGGCCTCGCCCCTAATGTCATCAACTCCTACCCGAGGTTCTCCTACACCAAGCATGCTCTGGCCTCTGCCTCCGCCGAAGATAACCATATCACGTGCTCTATCTGTTTGTGTGAGTACAAAGACTCTGAGATGCTGAGGATGATGCCGGAGTGCCGCCATTTCTTCCACCTTGTTTGCCTCGATGCATGGCTCAAGCTCAATGGCTCATGCCCGGTCTGTCGAAACTCCCCACTTCCCACGCCGATCTCGACCCCGTTGCAGGAGGTGGTGCCTCTCTCTCACTTCGCCGCTGATCGGAGGCGCAGCAGCAGTTGA 561 0.5954 MSSSSAAATSFLSNIGLGYSIAIALAFLFLLSTLLLSSYLCCRPDPPPPPAAATDGIILPRIVFVADDDHHHNRDDNPISSLGLAPNVINSYPRFSYTKHALASASAEDNHITCSICLCEYKDSEMLRMMPECRHFFHLVCLDAWLKLNGSCPVCRNSPLPTPISTPLQEVVPLSHFAADRRRSSS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00208 186 SMART ring_2 114 155 IPR001841 -
Accr7g00208 186 Pfam Ring finger domain 113 156 IPR001841 -
Accr7g00208 186 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Accr7g00208 186 SUPERFAMILY RING/U-box 113 161 - -
Accr7g00208 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 160 IPR013083 -
Accr7g00208 186 PANTHER RING-H2 FINGER PROTEIN ATL67 4 184 IPR044289 GO:0016567|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00208 Accr-Chr7 2734505 2735065 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00208 16 176 C3H Transcription Factor Family AT5G06490 35.260 1.85e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00208 - - twl:119984506 224.942