Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00160 ATGGGCTTTCCGGTAGGATACACCGACGTCGTTTTACCCAATCTCTTCCTCCACACTCTCTCCCTCCTCGGATTCATCCGCAACCTCATCTTCCTCCTCTTCCACTTCCTCGGCCTCTCCGATTTCCTCGAAACCGAGGTTGTCTGGTCCGAATCTCACGCCCGATTGCCCGACAGCCCTCCGGTGTCGGCGCTTCTGATCCGAGAATTCCTCCCCGTCGTCAAGTTCGCCGACCTCCTCGTCGCTGCCTCCAACTCCGCCGGCGACACGCCGGAGAGTTGCGCCGTCTGCCTCTACGAGTTCGAGTGCGAGGATGAAATCAGATGCTTGACGAATTGCAAGCACATTTTTCACCGGCCTTGTCTCGACCGTTGGATGGATCACGATCAGAAGACTTGTCCCTTGTGTAGGACCTCCTTTGTGCCTGATGATATGCAGGATGATTTCAATCAACGTCTCTGGGCTGCTTCTGGAGTCTCTGATGTTTATGGAGACTACACTTCCCTGTGA 510 0.551 MGFPVGYTDVVLPNLFLHTLSLLGFIRNLIFLLFHFLGLSDFLETEVVWSESHARLPDSPPVSALLIREFLPVVKFADLLVAASNSAGDTPESCAVCLYEFECEDEIRCLTNCKHIFHRPCLDRWMDHDQKTCPLCRTSFVPDDMQDDFNQRLWAASGVSDVYGDYTSL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00160 169 SUPERFAMILY RING/U-box 93 143 - -
Accr7g00160 169 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 157 - -
Accr7g00160 169 FunFam RING-H2 finger protein ATL73 67 144 - -
Accr7g00160 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 142 IPR013083 -
Accr7g00160 169 ProSiteProfiles Zinc finger RING-type profile. 94 137 IPR001841 -
Accr7g00160 169 SMART ring_2 94 136 IPR001841 -
Accr7g00160 169 Pfam Ring finger domain 93 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00160 Accr-Chr7 2045482 2045991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00160 1 168 C3H Transcription Factor Family AT1G63840 52.273 7.73e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00160 K16281 - qsa:O6P43_017655 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00160 7 2045482 2045991 Accr7g00160 7 2045482 2045991 ECH