Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00149 ATGAAAAGTCCAATTTCCGATCCACGTCGACGGACCTCCAGCTCCGGCTACCGCACGCCCGATCACCGCCACACCTACACTTCCAGCTATGATTCCTCCGGGGCTAGCACCAACATTGACAAGTCAAACTCCTCTCGTAACCCACTCGCGGCCGCAGCCAGATCAGTGGCCGCGGTTTTTGTTGCGTGCTTCACCCCGCCGGACGAGAGTAACTCCAAAAGCTTCGTCGATTCTCGGGAGTTCAAAGCTTCATCTTCCTCCTCCGTTGCATCCGATTCTTCGGGAGCTAGTGCTCAGAGAAGGCAAGGTTCACATCGACGATTGAGTTCCAGTTCATACAAGTTAACTCAGGGAAAAGAGCCTAGATCTCTGAATTTCACCATGGAGGATATCTTCAGAGCCACAAGAAACTTTTCCCCTGCTTACAAGGTCGGTCAAGGTGGTTTTGGTACAGTGTACAAGGCAAATCTCCAGGATGGAACTGTTGTTGCAGTAAAGCGTGCCAAGAAGAGTTTGTATGAGAAGCATTCGGCTAGTGAGTTCCAGAGTGAGATCCAAACGTTATCACGGGTTGAACATTTGAACTTGGTCAAGTTCTATGGATATTTGGAGCAAGGAGATGAAAGAATTCTTGTTGTGGAGTATGTCCCAAATGGAACCCTTAGAGAGCATTTAGATTGCAATCGTGGGAACATTTTGGACCTTGCTTCTCGTCTAGACATAGCCATTGATGTGGCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTATTATTCATAGAGACATTAAATCCTCCAACATTCTTATTACTGAAAATTTGAGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCACCTGACACTGATTCTGGTGCTACCCATGTTTCTACCCAAGTTAGAGGAACTGCCGGCTATTTGGATCCTGAATATCTCAAAACCTATCAACTGACGGAGAAGAGTGATGTCTATTCCTTTGGCGTTTTACTTGTTGAACTTGTCACAGGTAGACGTCCCATTGAACCAAAATTTGAACTGAAGGAGCGAATAACTGCAAGATGGGCTATGAAGAAATTCATTGACGGCAATGCCATCTCGGTGTTGGACCCAAAACTAGATCACAGTGCTGCAAATAATCTGGCTCTAGAAAAAATACTTGAACTAGCCTTGCAGTGTTTGGCACCTCGTAGACAAAGCAGGCCTAGTATGAAGAAGTGTGCTGAGATCCTTTGGACCATCCGTAAGGATTACAGAGAGCTATCAGCTGCATCAGATTTTCATTCATTTTCCTCTTCTTCCCAGAAGAGGGCATCGATAAAAGAGTGA 1335 0.4554 MKSPISDPRRRTSSSGYRTPDHRHTYTSSYDSSGASTNIDKSNSSRNPLAAAARSVAAVFVACFTPPDESNSKSFVDSREFKASSSSSVASDSSGASAQRRQGSHRRLSSSSYKLTQGKEPRSLNFTMEDIFRATRNFSPAYKVGQGGFGTVYKANLQDGTVVAVKRAKKSLYEKHSASEFQSEIQTLSRVEHLNLVKFYGYLEQGDERILVVEYVPNGTLREHLDCNRGNILDLASRLDIAIDVAHAITYLHMYIDHPIIHRDIKSSNILITENLRAKVADFGFARQAPDTDSGATHVSTQVRGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITARWAMKKFIDGNAISVLDPKLDHSAANNLALEKILELALQCLAPRRQSRPSMKKCAEILWTIRKDYRELSAASDFHSFSSSSQKRASIKE 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00149 444 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Accr7g00149 444 Gene3D Phosphorylase Kinase; domain 1 96 215 - -
Accr7g00149 444 MobiDBLite consensus disorder prediction 86 119 - -
Accr7g00149 444 MobiDBLite consensus disorder prediction 1 48 - -
Accr7g00149 444 SUPERFAMILY Protein kinase-like (PK-like) 120 417 IPR011009 -
Accr7g00149 444 SMART serkin_6 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00149 444 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 216 427 - -
Accr7g00149 444 MobiDBLite consensus disorder prediction 8 48 - -
Accr7g00149 444 CDD STKc_IRAK 144 413 - -
Accr7g00149 444 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 98 215 - -
Accr7g00149 444 Pfam Protein kinase domain 142 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g00149 444 Gene3D Transferase(Phosphotransferase) domain 1 216 438 - -
Accr7g00149 444 PANTHER OS01G0750732 PROTEIN 34 435 - -
Accr7g00149 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Accr7g00149 444 ProSiteProfiles Protein kinase domain profile. 138 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00149 Accr-Chr7 1776938 1779417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00149 126 416 Receptor kinase-like Gene Family AT1G30570 43.299 2.53e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Accr7g00149 Pkinase 1.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00149 - - qsa:O6P43_017649 622.854