Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00143 ATGCAATCTACTGGTCCCGGTAGTGGTGGACCCTGCCGGAACCCGGGAGTGGGGCCGGCAGGGCGCGCCGCATCGTCAGCTGCTTCCCAATCCTCTCCATCTTCGGCAGTTTCAACGCCTCACTTGGGGCTAGACACGTTGCAGCAGCAGCAACACCAACACCAGCAGATTGGTTCTAGGCAGTCATTGCAACCGCAACTACTTAGAAAACCTGAAGGGAATGAAACATTTTTAGCATATCAAGCAGGGCTTCAAGGGGTGTATGGTACTAACAATTTCTCATCTCCCAGTCCCGTACAACTGCCACAGCAATCACGGAAATCGATTGATTTCACTCAGCATGGTCCCAGTCAGGAGGCCCAGATCAGGGGTCAAGGCATGGAGCAACAAATGCCTAATCCTGTCAATCAGGCATACCTTCAAATTGCTCTGAAAGCTGCCCAGCAAAAGTCTGCTTTGGCAATGCAATCACAGCAGCAAACTAAAATGGGAATGTTAGGCTCTTCAACTGTAAAGGATCAAGAAATGCGTATGGGAAACTTGAAAATGCAGGAACTAATTCCCTTGCAGGCAATTAATCAAGCACATTGTTCGACTCCTAGGAATTCATCTGAACAATTCTCTCATGGGGAAAAGCAGATTGATCAAGGACAGCATCAAGCAATGGATCACAAGACTGAGGGAAAGTCTTCAACCCAGGGACCGGCCATTGGGCACGTAATGCCTGGAAACATGATAAGAGCCATGCAAGCACAAACAACTCCTCAAGGCATCCAAAATGCTGTGACCAACCAGATGGCGGTGTCTGCTCAACTGCATGCTTTGCAGGCATGGGCACATGAACGTAACATTGATCTATCGCATCCTTCAAATGCTAACTTAGTGGCACAACTCATTCCTATGATGCAGTCAAAGATGGTTTCACAACAAAAGTCAAATGAGAACAACGTTGCTCCTCAATCATCACCTGTCCCTGTTTCAAAACAGCAAGTTACTTCTCCGACGGAGAACCCAGCTCATGCTAATTCATCAAGTGATTTGTCTGGGAAGTCTGGATGTGCAAAAGCCAGGCAGACAGTTCCCCCCAGTCACTTCGTTCCACCAACAAATACTGGTACAACCAATAGTGGCAATGACGTGGCAGTGCAACAAATTAACATTCATGGCAGAGAGTCTCAAGCATCTCTCAGGCAGCCTGGTGCTGCTGGAAATGGATTGCCTCCTATGCATCCCCAACAGTTTTCTGCTAATATGAATCATGTTGCAGATCATCCTTTGAATGCCAAAAAATTACTACCAGGACCAGATTTACCACAAGTTCCATACATGAGGCAGTTAAACGAATCTTCTGCTCAGACTACTGGTTCCACAAATGAAGGGACTTCAGGAAATAATGTCAAACCCCTTGGGACACCAACTCAGATACCTCAGAAACGACCTGGATTTACCAAACAGCAGTTGCATGTACTTAAAGCACAGATATTAGCACTCAGGAGGCTGAAGAAAGGAGAGGGTGCACTTCCACAAGAACTTCTTCAGGCTATTGTTCCACCACCTCTTGAGTTGCAATTGCAGCAGACAATCCATCCTGCTGGAGGACAGAATATAGAGAAATCTGCTGGCAATACCGTGGCAGAACACCCAAGGCACATCGAATCCAAAATAAAGGATATCCAATCTGTCCCTGCAATAAATAAACTGAGTTCCTCGAAGCAGGAAGCCTCTTCCAGAGATGAGAAATCCACTGCTCCAACTGTTCATATGCAAGCTATGCCGGTTGGGCCAAAGGAAACTGCTTCTGTTGGAAAAGAAGAGCAGCAATCAATGAAGTCAGACCAGGAGAATGATCGTGGAATTAACAGAACTCCTGTTAGAACAGAGTTGCCTCTAGATAGGGGAAAGGCTATCGTTCCGCATGACACAGTTCAACTTAACAAACCTGCACAAACTAGCTCTGTTACTCAACCAAAGGATATGGCATCCACAAGAAAATATCATGGGCCCCTTTTTGATTTCCCTTTTTTCACTAGGAAATCTGACTCATTTGGGTCATCTATGTTGGTGAACAACAATAATTTGTCTCTGGCCTATGATGTCAAAGATCTTCTTTATGAGGAAGGCATGGAAGTACTTACAAAGAGAAGGGCAGAAAATATAAAAAAGATTGAAGGTTTACTGGCAGTGAACTTGGAGAGAAAAAGAATTAGGCCAGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGCTTCGTCTTTTAGATCTTCAGGCACGACTGAGGGATGAGATTGATCAGCAGCAACAAGAGATAATGACAATGCCAGATAGGCCATATCGTAAGTTTGTTAGACTGTGTGAGCGTCAACGTATTGAACTTGCTAGACAAGTGCAAGCCTCTCAGAAAGCTCTACGGGAGAAACAACTCAAATCTATATTTCAGTGGCGCAAGAAGCTTCTTGAGGCACATTGGGCTGTACGTGATGCTCGAATTGCCCGCAACAGGGGTGTGGGCAAATATCATGAGAGAATGTTGAGGGAATTCTCAAAGCATAAAGATGATGATAGGAACAAAAGGATGGAAGCCTTGAAAAATAATGATGTTGACCGATACCGGGAGATGTTGTTAGAGCAGCAGACTAACCTCTCGGGTGATGCTGCAGAGAGATATGCTGTGCTTTCATCCTTCTTAACTCAGACTGAGGACTATTTACAAAAATTGGGAAGTAAAATAACAGCTGCCAAAAATCAGCAGGAAGTGGAGGAAGCTGCAAGAACCGCTGCAGCTGCAGCACGATTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAGCTTGTGCTGGGGAGGAAGTGATGATTAGAAATCGTTTTATGGAGATGAATGCTCCTAAAGACAGTTCTTCTGTCAGCAAGTATTACAGCCTTGCTCATGCCGTGAATGAAAAGGTCATAAGGCAGCCATCTATGTTACGAGCTGGAACCTTGAGAGATTATCAGCTTGTTGGCTTGCAGTGGATGCTTTCATTGTATAACAACAAGTTAAATGGAATTTTAGCAGATGAGATGGGTCTTGGTAAAACCGTCCAGGTTATGGCCTTGATTGCCTACTTGATGGAATTTAAAGGAAATTACGGCCCACATCTTATAATTGTTCCAAATGCAGTTCTGGTCAACTGGAAGAGTGAGTTGTATAATTGGTTACCCTCTGTGTCGTGCATTTTTTACGTTGGAGGAAAGGACCAACGATCAAAATTATTTTCTCAAGAGGTTTCTGCCATGAAATTTAATGTCCTTGTGACAACTTATGAGTTCATCATGTATGACCGGTCCAAATTGTCAAAAATTGATTGGAAGTATATCGTAATTGATGAAGCACAAAGAATGAAGGATAGGGATTCAGTTCTAGCTCGCGATCTTGATAGATACCGTTGTCAGAGACGTCTTCTTCTGACAGGAACACCATTGCAGAATGATCTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCTGAGGTTTTTGATAATCGAAAAGCATTTCATGATTGGTTTTCAAAACCTTTTCAAAAGGAAGATCCTACTCAAATTGTAGAGGATGATTGGCTTGAGACAGAAAAGAAAGTTATCATTATTCATCGACTCCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTTGAAGATGTTGAAGGCTCACTACCACCAAAGGTCTCCAAAGTTTTACGATGTAGAATGTCAGCTATTCAGAGTGCCATTTATGACTGGATCAAATTCACTGGTACCCTTCGGCTTGATCCTGAGGATGAGAAGCTTAGAGTTCAAAAGAGTCCACTTTACCAGGACCTCTCCAAAGAGTTCCTTCTAAAATCTTGTGGGAAATTGTGGATCCTTGATAGGATCCTTATTAAACTGCATCGAACTGGACATCGAGTTCTGCTGTTTAGTACCATGACAAAACTTCTAGACATTATAGAAGAATACCTGCAGTGGCGACGGCTTGTTTACAGAAGAATTGATGGGACAACTAGTTTGGAAGACCGTGAAGCAGCTATAGTGGACTTTAATAGCCCAGGTTCAGATTGTTTCATCTTCTTGCTTAGTATTAGAGCTGCTGGGAGAGGCCTCAACCTTCAGTCTGCAGACACAGTCATCATATATGATCCTGATCCAAACCCAAAAAATGAGGAGCAGGCAGTTGCGAGAGCTCATCGCATTGGACAGACTAGAGAAGTCAGGGTTATCTACATGGAAGCTGTTGTTGACCAAATTCCTAGCCATCAAAAAGAGGATGAACATAGAAGTGGGGGCACTGTGAATTTGGAGGATGAACTTGCAGGCAAGGATCGTTATATGGGATCCATTGAGAGCCTAATTAGGAACAATATTCAACAATACAAGATTGATATGGCCGATGAGGTCATCAATGCTGGACGTTTTGATCAAAGAACTACACATGAAGAGAGACGTATGACTTTGGAGACATTATTACATGATGAAGAAAGGTATCAAAAAACCGTCCTTGATGTTCCCTCACCACAGGAGGTGAATCGCATGATTGCCAGGAGTGAGGAAGAACTCGAGCTGTTTGATCAAATGGATGAAGAACTAGATTGGACTGAGGAGATGACACGGTATGATCAGGTGCCTGAGTGGCTTAGAGCCAGTACAAGAGAAGTTAACGCCACTATTGCTGCGTTATCAAAAAGACCTTCAAAGAACACTTTCTTGAGTGGTAGTATCGCTGTGGAATCCAATGACATGGGTTCTGATGCATCTGCAAAAACTGAAAGGAGAAGAGGTCGACCCAAGGGGAAAAAACATCCTAGTTATAAAGAGTTAGAAGATGAAAATGGAGAATCCTCTGAAGCAAGTTCTGAAGAAAGAAATGGATATTCTGCAAATGAAGAAGGGGAAATAGGAGAATTTGAAGATGATGGGTATAGTGGTGATGATGGAGCTCAACTAAATAATAAAGATCAAATGGATGATGGTCCACTTTGTGATGCAGGATATGAATTTCCTCGTTCCTCAGAAAGCATGAGAAACTGTCATATGGTTGAAGAAGCTGCTTCCTCAGGATCATCCTCAGACAATCAAAGATTGACAGAGACTATATTTCCTTCAGTTTCCCCTCAGAAATTTGGTTCCCTCTCTGCATTAGATTCTAGGCCAAGTTCCATTTCCAAAAGGGTGGCAGATGACTTAGAGGAAGGGGAAATTGCAGTATCTGGTGATTCTCTCATGGATCGCCAGCAATCTGGCAGTTGGATTCATGATCGCGATGAAGGAGAAGATGAACAAGTTTTGCAGCCCAAATTTAGACGTAAACGCAGTCACCGTGTTCGACCACGTCATGCTACCGACAGGGTTGAGGAAAAGCCTAGCAGTGAGATGACATCTCATCAACGTGGAGAATCAGCGTCTTTGGCTGTCCAAGCAGACCAGGATGGTGGTGAACAACTCAGAGAGAAGTGGGAGGGCAAGCCTATCAATTCAAGTGGGCCTTCAGCTATTGGTGCCAAAATGTCTGAAATAGTCCAGAGAAAGTGCAAGAATGTAATTGCCAAGTTTCAAAGGAGAATAGGTAAGGAAGGTCATCAAATTGTACCTTTGCTTACTGACTTGTGGAAGAAGAATTCCGGACACACTGGTGGATGTGGGAATAATTGGTTGGACATACAGAAGATTGACCAGCGAATTGATAGGTTTGAATATAATGGAGTATTGGAGCTTGTGTGTGATGTGCAGTTCATGTTGAAGTGTGCAATGGATTTTTATGGGTTCTCACATGAGGTAAGATCTGAAGCAAGGAAGGTCCACGATCTCTTCTTTAGTATCTTGGAAGTTGCATTTCCTGATACGGACTTCCAAGGGCCAAGAATTGCACTTTCTTTTGCTGCACCGGCTCCCGTTAGTACTCTAACATCCCCGAGGCACTTAGCTGGGAGCCAAAGCAGAAGACACAAGATGATAAATGAGGTGGAAAATGATCCAAGCCCTTCAATGAAGCAACTGCATCAGGGTTTTGTTCCAAGCGGCGAAAGCACCAGGATCAGAGTGCAGCTGCCACCGAAGGATTCAAGAACTGGAACTGCTTCTGGCAGTGTAAGAGAGCAAATTCCGCAGGATGATTCTTTGATTCTTGCTCATCCACGTGAACTGGTAGTATGCAGAAAGAGAAGAAATGAGAGGGACAAGTCCACAGGGAAGACTAGGGGTGGCTCAGCCGGACCTGTTTCACCGCCTAGCTCTGGTCCTGCTATAAGAAGTCCAGGACCGAGTTCAGGTTCAAAGGATGCTAGACTAGGTAAACAGCCTGCTCAAGGGTGGACGCGCCAGTCATCTCAACAACCGAATGGGTCTGACAGTTGGGCAAATCCTGTGAAGCGGTTGAGGACGGGTAAAAGGAGGCGCCATCAATAG 6426 0.4418 MQSTGPGSGGPCRNPGVGPAGRAASSAASQSSPSSAVSTPHLGLDTLQQQQHQHQQIGSRQSLQPQLLRKPEGNETFLAYQAGLQGVYGTNNFSSPSPVQLPQQSRKSIDFTQHGPSQEAQIRGQGMEQQMPNPVNQAYLQIALKAAQQKSALAMQSQQQTKMGMLGSSTVKDQEMRMGNLKMQELIPLQAINQAHCSTPRNSSEQFSHGEKQIDQGQHQAMDHKTEGKSSTQGPAIGHVMPGNMIRAMQAQTTPQGIQNAVTNQMAVSAQLHALQAWAHERNIDLSHPSNANLVAQLIPMMQSKMVSQQKSNENNVAPQSSPVPVSKQQVTSPTENPAHANSSSDLSGKSGCAKARQTVPPSHFVPPTNTGTTNSGNDVAVQQINIHGRESQASLRQPGAAGNGLPPMHPQQFSANMNHVADHPLNAKKLLPGPDLPQVPYMRQLNESSAQTTGSTNEGTSGNNVKPLGTPTQIPQKRPGFTKQQLHVLKAQILALRRLKKGEGALPQELLQAIVPPPLELQLQQTIHPAGGQNIEKSAGNTVAEHPRHIESKIKDIQSVPAINKLSSSKQEASSRDEKSTAPTVHMQAMPVGPKETASVGKEEQQSMKSDQENDRGINRTPVRTELPLDRGKAIVPHDTVQLNKPAQTSSVTQPKDMASTRKYHGPLFDFPFFTRKSDSFGSSMLVNNNNLSLAYDVKDLLYEEGMEVLTKRRAENIKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQEIMTMPDRPYRKFVRLCERQRIELARQVQASQKALREKQLKSIFQWRKKLLEAHWAVRDARIARNRGVGKYHERMLREFSKHKDDDRNKRMEALKNNDVDRYREMLLEQQTNLSGDAAERYAVLSSFLTQTEDYLQKLGSKITAAKNQQEVEEAARTAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSSVSKYYSLAHAVNEKVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELYNWLPSVSCIFYVGGKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEDPTQIVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSKVLRCRMSAIQSAIYDWIKFTGTLRLDPEDEKLRVQKSPLYQDLSKEFLLKSCGKLWILDRILIKLHRTGHRVLLFSTMTKLLDIIEEYLQWRRLVYRRIDGTTSLEDREAAIVDFNSPGSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVRVIYMEAVVDQIPSHQKEDEHRSGGTVNLEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQKTVLDVPSPQEVNRMIARSEEELELFDQMDEELDWTEEMTRYDQVPEWLRASTREVNATIAALSKRPSKNTFLSGSIAVESNDMGSDASAKTERRRGRPKGKKHPSYKELEDENGESSEASSEERNGYSANEEGEIGEFEDDGYSGDDGAQLNNKDQMDDGPLCDAGYEFPRSSESMRNCHMVEEAASSGSSSDNQRLTETIFPSVSPQKFGSLSALDSRPSSISKRVADDLEEGEIAVSGDSLMDRQQSGSWIHDRDEGEDEQVLQPKFRRKRSHRVRPRHATDRVEEKPSSEMTSHQRGESASLAVQADQDGGEQLREKWEGKPINSSGPSAIGAKMSEIVQRKCKNVIAKFQRRIGKEGHQIVPLLTDLWKKNSGHTGGCGNNWLDIQKIDQRIDRFEYNGVLELVCDVQFMLKCAMDFYGFSHEVRSEARKVHDLFFSILEVAFPDTDFQGPRIALSFAAPAPVSTLTSPRHLAGSQSRRHKMINEVENDPSPSMKQLHQGFVPSGESTRIRVQLPPKDSRTGTASGSVREQIPQDDSLILAHPRELVVCRKRRNERDKSTGKTRGGSAGPVSPPSSGPAIRSPGPSSGSKDARLGKQPAQGWTRQSSQQPNGSDSWANPVKRLRTGKRRRHQ 2141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00143 2141 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1297 1474 IPR001650 -
Accr7g00143 2141 FunFam ATP-dependent helicase BRM 986 1234 - -
Accr7g00143 2141 Pfam SNF2-related domain 998 1264 IPR000330 GO:0005524|GO:0140658
Accr7g00143 2141 MobiDBLite consensus disorder prediction 24 64 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1995 2141 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1 64 - -
Accr7g00143 2141 Pfam Helicase conserved C-terminal domain 1296 1407 IPR001650 -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 2027 2041 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 553 620 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1586 1813 - -
Accr7g00143 2141 Coils Coil 745 769 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1755 1773 - -
Accr7g00143 2141 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1007 1172 IPR014001 -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1998 2012 - -
Accr7g00143 2141 SUPERFAMILY Bromodomain 1893 1954 IPR036427 GO:0005515
Accr7g00143 2141 MobiDBLite consensus disorder prediction 363 378 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 199 235 - -
Accr7g00143 2141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 976 1225 IPR027417 -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 306 352 - -
Accr7g00143 2141 CDD SF2_C_SNF 1292 1417 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1689 1726 - -
Accr7g00143 2141 ProSiteProfiles QLQ domain profile. 481 517 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr7g00143 2141 MobiDBLite consensus disorder prediction 199 215 - -
Accr7g00143 2141 SMART bromo_6 1844 1953 IPR001487 GO:0005515
Accr7g00143 2141 SMART ultradead3 991 1180 IPR014001 -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 1785 1800 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 2108 2127 - -
Accr7g00143 2141 SMART QLQ_2 480 517 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr7g00143 2141 MobiDBLite consensus disorder prediction 448 470 - -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 306 378 - -
Accr7g00143 2141 Pfam QLQ 482 515 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr7g00143 2141 Gene3D - 964 1249 IPR038718 -
Accr7g00143 2141 PANTHER SNF2/RAD54 HELICASE FAMILY 741 1764 - -
Accr7g00143 2141 Gene3D - 1269 1529 IPR027417 -
Accr7g00143 2141 SMART helicmild6 1323 1407 IPR001650 -
Accr7g00143 2141 FunFam Brahma1 1842 1963 - -
Accr7g00143 2141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1115 1417 IPR027417 -
Accr7g00143 2141 MobiDBLite consensus disorder prediction 2054 2071 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00143 Accr-Chr7 1676372 1688347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00143 1267 1414 RAD5 or RAD16-like Gene Family AT5G43530 37.162 2.91e-16 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Accr7g00143 SNF2_N 1.8e-62 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00143 K11647 - qsa:O6P43_027247 2979.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00143 7 1676372 1688347 Accr7g00143 7 1676372 1688347 ECH