Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00142 ATGCAATCTACTGGTCCCGGTAGTGGTGGACCCTGCCGGAACCCGGGAGTGGGGCCGGCAGGGCGCGCCGCATCGTCAGCTGCTTCCCAATCCTCTCCATCTTCGGCAGTTTCAACGCCTCACTTGGGGCTAGACACGTTGCAGCAGCAGCAACACCAACACCAGCAGATTGGTTCTAGGCAGTCATTGCAACCGCAACTACTTAGAAAACCTGAAGGGAATGAAACATTTTTAGCATATCAAGCAGGGCTTCAAGGGGTGTATGGTACTAACAATTTCTCATCTCCCAGTCCCGTACAACTGCCACAGCAATCACGGAAATCGATTGATTTCACTCAGCATGGTCCCAGTCAGGAGGCCCAGATCAGGGGTCAAGGCATGGAGCAACAAATGCCTAATCCTGTCAATCAGGCATACCTTCAAATTGCTCTGAAAGCTGCCCAGCAAAAGTCTGCTTTGGCAATGCAATCACAGCAGCAAACTAAAATGGGAATGTTAGGCTCTTCAACTGTAAAGGATCAAGAAATGCGTATGGGAAACTTGAAAATGCAGGAACTAATTCCCTTGCAGGCAATTAATCAAGCACATTGTTCGACTCCTAGGAATTCATCTGAACAATTCTCTCATGGGGAAAAGCAGATTGATCAAGGACAGCATCAAGCAATGGATCACAAGACTGAGGGAAAGTCTTCAACCCAGGGACCGGCCATTGGGCACGTAATGCCTGGAAACATGATAAGAGCCATGCAAGCACAAACAACTCCTCAAGGCATCCAAAATGCTGTGACCAACCAGATGGCGGTGTCTGCTCAACTGCATGCTTTGCAGGCATGGGCACATGAACGTAACATTGATCTATCGCATCCTTCAAATGCTAACTTAGTGGCACAACTCATTCCTATGATGCAGTCAAAGATGGTTTCACAACAAAAGTCAAATGAGAACAACGTTGCTCCTCAATCATCACCTGTCCCTGTTTCAAAACAGCAAGTTACTTCTCCGACGGAGAACCCAGCTCATGCTAATTCATCAAGTGATTTGTCTGGGAAGTCTGGATGTGCAAAAGCCAGGCAGACAGTTCCCCCCAGTCACTTCGTTCCACCAACAAATACTGGTACAACCAATAGTGGCAATGACGTGGCAGTGCAACAAATTAACATTCATGGCAGAGAGTCTCAAGCATCTCTCAGGCAGCCTGGTGCTGCTGGAAATGGATTGCCTCCTATGCATCCCCAACAGTTTTCTGCTAATATGAATCATGTTGCAGATCATCCTTTGAATGCCAAAAAATTACTACCAGGACCAGATTTACCACAAGTTCCATACATGAGGCAGTTAAACGAATCTTCTGCTCAGACTACTGGTTCCACAAATGAAGGGACTTCAGGAAATAATGTCAAACCCCTTGGGACACCAACTCAGATACCTCAGAAACGACCTGGATTTACCAAACAGCAGTTGCATGTACTTAAAGCACAGATATTAGCACTCAGGAGGCTGAAGAAAGGAGAGGGTGCACTTCCACAAGAACTTCTTCAGGCTATTGTTCCACCACCTCTTGAGTTGCAATTGCAGCAGACAATCCATCCTGCTGGAGGACAGAATATAGAGAAATCTGCTGGCAATACCGTGGCAGAACACCCAAGGCACATCGAATCCAAAATAAAGGATATCCAATCTGTCCCTGCAATAAATAAACTGAGTTCCTCGAAGCAGGAAGCCTCTTCCAGAGATGAGAAATCCACTGCTCCAACTGTTCATATGCAAGCTATGCCGGTTGGGCCAAAGGAAACTGCTTCTGTTGGAAAAGAAGAGCAGCAATCAATGAAGTCAGACCAGGAGAATGATCGTGGAATTAACAGAACTCCTGTTAGAACAGAGTTGCCTCTAGATAGGGGAAAGGCTATCGTTCCGCATGACACAGTTCAACTTAACAAACCTGCACAAACTAGCTCTGTTACTCAACCAAAGGATATGGCATCCACAAGAAAATATCATGGGCCCCTTTTTGATTTCCCTTTTTTCACTAGGAAATCTGACTCATTTGGGTCATCTATGTTGGTGAACAACAATAATTTGTCTCTGGCCTATGATGTCAAAGATCTTCTTTATGAGGAAGGCATGGAAGTACTTACAAAGAGAAGGGCAGAAAATATAAAAAAGATTGAAGGTTTACTGGCAGTGAACTTGGAGAGAAAAAGAATTAGGCCAGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGCTTCGTCTTTTAGATCTTCAGGCACGACTGAGGGATGAGATTGATCAGCAGCAACAAGAGATAATGACAATGCCAGATAGGCCATATCGTAAGTTTGTTAGACTGTGTGAGCGTCAACGTATTGAACTTGCTAGACAAGTGCAAGCCTCTCAGAAAGCTCTACGGGAGAAACAACTCAAATCTATATTTCAGTGGCGCAAGAAGCTTCTTGAGGCACATTGGGCTGTACGTGATGCTCGAATTGCCCGCAACAGGGGTGTGGGCAAATATCATGAGAGAATGTTGAGGGAATTCTCAAAGCATAAAGATGATGATAGGAACAAAAGGATGGAAGCCTTGAAAAATAATGATGTTGACCGATACCGGGAGATGTTGTTAGAGCAGCAGACTAACCTCTCGGGTGATGCTGCAGAGAGATATGCTGTGCTTTCATCCTTCTTAACTCAGACTGAGGACTATTTACAAAAATTGGGAAGTAAAATAACAGCTGCCAAAAATCAGCAGGAAGTGGAGGAAGCTGCAAGAACCGCTGCAGCTGCAGCACGATTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAGCTTGTGCTGGGGAGGAAGTGATGATTAGAAATCGTTTTATGGAGATGAATGCTCCTAAAGACAGTTCTTCTGTCAGCAAGTATTACAGCCTTGCTCATGCCGTGAATGAAAAGGTCATAAGGCAGCCATCTATGTTACGAGCTGGAACCTTGAGAGATTATCAGCTTGTTGGCTTGCAGTGGATGCTTTCATTGTATAACAACAAGTTAAATGGAATTTTAGCAGATGAGATGGGTCTTGGTAAAACCGTCCAGGTTATGGCCTTGATTGCCTACTTGATGGAATTTAAAGGAAATTACGGCCCACATCTTATAATTGTTCCAAATGCAGTTCTGGTCAACTGGAAGAGTGAGTTGTATAATTGGTTACCCTCTGTGTCGTGCATTTTTTACGTTGGAGGAAAGGACCAACGATCAAAATTATTTTCTCAAGAGGTTTCTGCCATGAAATTTAATGTCCTTGTGACAACTTATGAGTTCATCATGTATGACCGGTCCAAATTGTCAAAAATTGATTGGAAGTATATCGTAATTGATGAAGCACAAAGAATGAAGGATAGGGATTCAGTTCTAGCTCGCGATCTTGATAGATACCGTTGTCAGAGACGTCTTCTTCTGACAGGAACACCATTGCAGAATGATCTGAAGGAACTCTGGTCACTTTTAAATTTACTTCTTCCTGAGGTTTTTGATAATCGAAAAGCATTTCATGATTGGTTTTCAAAACCTTTTCAAAAGGAAGATCCTACTCAAATTGTAGAGGATGATTGGCTTGAGACAGAAAAGAAAGTTATCATTATTCATCGACTCCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTTGAAGATGTTGAAGGCTCACTACCACCAAAGGTCTCCAAAGTTTTACGATGTAGAATGTCAGCTATTCAGAGTGCCATTTATGACTGGATCAAATTCACTGGTACCCTTCGGCTTGATCCTGAGGATGAGAAGCTTAGAGTTCAAAAGAGTCCACTTTACCAGGTGAAGCAGTATAAAACTTTAAATAATAGATGCATGGAGCTGCGCAAGACCTGCAATCATCCATTGCTTAATTACCCATACTTCCAGGACCTCTCCAAAGAGTTCCTTCTAAAATCTTGTGGGAAATTGTGGATCCTTGATAGGATCCTTATTAAACTGCATCGAACTGGACATCGAGTTCTGCTGTTTAGTACCATGACAAAACTTCTAGACATTATAGAAGAATACCTGCAGTGGCGACGGCTTGTTTACAGAAGAATTGATGGGACAACTAGTTTGGAAGACCGTGAAGCAGCTATAGTGGACTTTAATAGCCCAGGTTCAGATTGTTTCATCTTCTTGCTTAGTATTAGAGCTGCTGGGAGAGGCCTCAACCTTCAGTCTGCAGACACAGTCATCATATATGATCCTGATCCAAACCCAAAAAATGAGGAGCAGGCAGTTGCGAGAGCTCATCGCATTGGACAGACTAGAGAAGTCAGGGTTATCTACATGGAAGCTGTTGTTGACCAAATTCCTAGCCATCAAAAAGAGGATGAACATAGAAGTGGGGGCACTGTGAATTTGGAGGATGAACTTGCAGGCAAGGATCGTTATATGGGATCCATTGAGAGCCTAATTAGGAACAATATTCAACAATACAAGATTGATATGGCCGATGAGGTCATCAATGCTGGACGTTTTGATCAAAGAACTACACATGAAGAGAGACGTATGACTTTGGAGACATTATTACATGATGAAGAAAGGTATCAAAAAACCGTCCTTGATGTTCCCTCACCACAGGAGGTGAATCGCATGATTGCCAGGAGTGAGGAAGAACTCGAGCTGTTTGATCAAATGGATGAAGAACTAGATTGGACTGAGGAGATGACACGGTATGATCAGGTGCCTGAGTGGCTTAGAGCCAGTACAAGAGAAGTTAACGCCACTATTGCTGCGTTATCAAAAAGACCTTCAAAGAACACTTTCTTGAGTGGTAGTATCGCTGTGGAATCCAATGACATGGGTTCTGATGCATCTGCAAAAACTGAAAGGAGAAGAGGTCGACCCAAGGGGAAAAAACATCCTAGTTATAAAGAGTTAGAAGATGAAAATGGAGAATCCTCTGAAGCAAGTTCTGAAGAAAGAAATGGATATTCTGCAAATGAAGAAGGGGAAATAGGAGAATTTGAAGATGATGGGTATAGTGGTGATGATGGAGCTCAACTAAATAATAAAGATCAAATGGATGATGGTCCACTTTGTGATGCAGGATATGAATTTCCTCGTTCCTCAGAAAGCATGAGAAACTGTCATATGGTTGAAGAAGCTGCTTCCTCAGGATCATCCTCAGACAATCAAAGATTGACAGAGACTATATTTCCTTCAGTTTCCCCTCAGAAATTTGGTTCCCTCTCTGCATTAGATTCTAGGCCAAGTTCCATTTCCAAAAGGGTGGCAGATGACTTAGAGGAAGGGGAAATTGCAGTATCTGGTGATTCTCTCATGGATCGCCAGCAATCTGGCAGTTGGATTCATGATCGCGATGAAGGAGAAGATGAACAAGTTTTGCAGCCCAAATTTAGACGTAAACGCAGTCACCGTGTTCGACCACGTCATGCTACCGACAGGGTTGAGGAAAAGCCTAGCAGTGAGATGACATCTCATCAACGTGGAGAATCAGCGTCTTTGGCTGTCCAAGCAGACCGTAAATATCGTGCACAACCACGGACTGACCCTGATGTTAAATCACGTGGAGAATTTAATGCTGGCTTGCATGATCAGAATGACTCATTGTTAAAAAATAAGCGAAGTTTGCCTTCAAAGAGAGTAACTTATAAATTACGTGGTTCACCTAAATCTGGTAGATTGAATTGTATTTCTGCCCCTTCAGAGGATGGTGGTGAACAACTCAGAGAGAAGTGGGAGGGCAAGCCTATCAATTCAAGTGGGCCTTCAGCTATTGGTGCCAAAATGTCTGAAATAGTCCAGAGAAAGTGCAAGAATGTAATTGCCAAGTTTCAAAGGAGAATAGGTAAGGAAGGTCATCAAATTGTACCTTTGCTTACTGACTTGTGGAAGAAGAATTCCGGACACACTGGTGGATGTGGGAATAATTGGTTGGACATACAGAAGATTGACCAGCGAATTGATAGGTTTGAATATAATGGAGTATTGGAGCTTGTGTGTGATGTGCAGTTCATGTTGAAGTGTGCAATGGATTTTTATGGGTTCTCACATGAGGTAAGATCTGAAGCAAGGAAGGTCCACGATCTCTTCTTTAGTATCTTGGAAGTTGCATTTCCTGATACGGACTTCCAAGGGCCAAGAATTGCACTTTCTTTTGCTGCACCGGCTCCCGTTAGTACTCTAACATCCCCGAGGCACTTAGCTGGGAGCCAAAGCAGAAGACACAAGATGATAAATGAGGTGGAAAATGATCCAAGCCCTTCAATGAAGCAACTGCATCAGGGTTTTGTTCCAAGCGGCGAAAGCACCAGGATCAGAGTGCAGCTGCCACCGAAGGATTCAAGAACTGGAACTGCTTCTGGCAGTGTAAGAGAGCAAATTCCGCAGGATGATTCTTTGATTCTTGCTCATCCACGTGAACTGGTAGTATGCAGAAAGAGAAGAAATGAGAGGGACAAGTCCACAGGGAAGACTAGGGGTGGCTCAGCCGGACCTGTTTCACCGCCTAGCTCTGGTCCTGCTATAAGAAGTCCAGGACCGAGTTCAGGTTCAAAGGATGCTAGACTAGGTAAACAGCCTGCTCAAGGGTGGACGCGCCAGTCATCTCAACAACCGAATGGGTCTGACAGTTGGGCAAATCCTGTGAAGCGGTTGAGGACGGGTAAAAGGAGGCGCCATCAATAG 6699 0.4395 MQSTGPGSGGPCRNPGVGPAGRAASSAASQSSPSSAVSTPHLGLDTLQQQQHQHQQIGSRQSLQPQLLRKPEGNETFLAYQAGLQGVYGTNNFSSPSPVQLPQQSRKSIDFTQHGPSQEAQIRGQGMEQQMPNPVNQAYLQIALKAAQQKSALAMQSQQQTKMGMLGSSTVKDQEMRMGNLKMQELIPLQAINQAHCSTPRNSSEQFSHGEKQIDQGQHQAMDHKTEGKSSTQGPAIGHVMPGNMIRAMQAQTTPQGIQNAVTNQMAVSAQLHALQAWAHERNIDLSHPSNANLVAQLIPMMQSKMVSQQKSNENNVAPQSSPVPVSKQQVTSPTENPAHANSSSDLSGKSGCAKARQTVPPSHFVPPTNTGTTNSGNDVAVQQINIHGRESQASLRQPGAAGNGLPPMHPQQFSANMNHVADHPLNAKKLLPGPDLPQVPYMRQLNESSAQTTGSTNEGTSGNNVKPLGTPTQIPQKRPGFTKQQLHVLKAQILALRRLKKGEGALPQELLQAIVPPPLELQLQQTIHPAGGQNIEKSAGNTVAEHPRHIESKIKDIQSVPAINKLSSSKQEASSRDEKSTAPTVHMQAMPVGPKETASVGKEEQQSMKSDQENDRGINRTPVRTELPLDRGKAIVPHDTVQLNKPAQTSSVTQPKDMASTRKYHGPLFDFPFFTRKSDSFGSSMLVNNNNLSLAYDVKDLLYEEGMEVLTKRRAENIKKIEGLLAVNLERKRIRPDLVLRLQIEEKKLRLLDLQARLRDEIDQQQQEIMTMPDRPYRKFVRLCERQRIELARQVQASQKALREKQLKSIFQWRKKLLEAHWAVRDARIARNRGVGKYHERMLREFSKHKDDDRNKRMEALKNNDVDRYREMLLEQQTNLSGDAAERYAVLSSFLTQTEDYLQKLGSKITAAKNQQEVEEAARTAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSSVSKYYSLAHAVNEKVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELYNWLPSVSCIFYVGGKDQRSKLFSQEVSAMKFNVLVTTYEFIMYDRSKLSKIDWKYIVIDEAQRMKDRDSVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSKPFQKEDPTQIVEDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSKVLRCRMSAIQSAIYDWIKFTGTLRLDPEDEKLRVQKSPLYQVKQYKTLNNRCMELRKTCNHPLLNYPYFQDLSKEFLLKSCGKLWILDRILIKLHRTGHRVLLFSTMTKLLDIIEEYLQWRRLVYRRIDGTTSLEDREAAIVDFNSPGSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVRVIYMEAVVDQIPSHQKEDEHRSGGTVNLEDELAGKDRYMGSIESLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQKTVLDVPSPQEVNRMIARSEEELELFDQMDEELDWTEEMTRYDQVPEWLRASTREVNATIAALSKRPSKNTFLSGSIAVESNDMGSDASAKTERRRGRPKGKKHPSYKELEDENGESSEASSEERNGYSANEEGEIGEFEDDGYSGDDGAQLNNKDQMDDGPLCDAGYEFPRSSESMRNCHMVEEAASSGSSSDNQRLTETIFPSVSPQKFGSLSALDSRPSSISKRVADDLEEGEIAVSGDSLMDRQQSGSWIHDRDEGEDEQVLQPKFRRKRSHRVRPRHATDRVEEKPSSEMTSHQRGESASLAVQADRKYRAQPRTDPDVKSRGEFNAGLHDQNDSLLKNKRSLPSKRVTYKLRGSPKSGRLNCISAPSEDGGEQLREKWEGKPINSSGPSAIGAKMSEIVQRKCKNVIAKFQRRIGKEGHQIVPLLTDLWKKNSGHTGGCGNNWLDIQKIDQRIDRFEYNGVLELVCDVQFMLKCAMDFYGFSHEVRSEARKVHDLFFSILEVAFPDTDFQGPRIALSFAAPAPVSTLTSPRHLAGSQSRRHKMINEVENDPSPSMKQLHQGFVPSGESTRIRVQLPPKDSRTGTASGSVREQIPQDDSLILAHPRELVVCRKRRNERDKSTGKTRGGSAGPVSPPSSGPAIRSPGPSSGSKDARLGKQPAQGWTRQSSQQPNGSDSWANPVKRLRTGKRRRHQ 2232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00142 2232 MobiDBLite consensus disorder prediction 24 64 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 1 64 - -
Accr7g00142 2232 SMART helicmild6 1352 1436 IPR001650 -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 2086 2232 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 553 620 - -
Accr7g00142 2232 CDD SF2_C_SNF 1321 1446 - -
Accr7g00142 2232 Coils Coil 745 769 - -
Accr7g00142 2232 FunFam Brahma1 1933 2054 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 2199 2218 - -
Accr7g00142 2232 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1007 1172 IPR014001 -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 1615 1872 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 1718 1755 - -
Accr7g00142 2232 SUPERFAMILY Bromodomain 1984 2045 IPR036427 GO:0005515
Accr7g00142 2232 MobiDBLite consensus disorder prediction 363 378 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 2118 2132 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 199 235 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 306 352 - -
Accr7g00142 2232 ProSiteProfiles QLQ domain profile. 481 517 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr7g00142 2232 MobiDBLite consensus disorder prediction 199 215 - -
Accr7g00142 2232 SMART ultradead3 991 1180 IPR014001 -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 2089 2103 - -
Accr7g00142 2232 Gene3D - 986 1234 IPR038718 -
Accr7g00142 2232 PANTHER SNF2/RAD54 HELICASE FAMILY 741 1791 - -
Accr7g00142 2232 SMART QLQ_2 480 517 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr7g00142 2232 MobiDBLite consensus disorder prediction 448 470 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 306 378 - -
Accr7g00142 2232 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1326 1503 IPR001650 -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 1847 1865 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 1814 1829 - -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 1784 1802 - -
Accr7g00142 2232 FunFam ATP-dependent helicase BRM 986 1234 - -
Accr7g00142 2232 Gene3D - 1235 1444 IPR027417 -
Accr7g00142 2232 Pfam Helicase conserved C-terminal domain 1325 1436 IPR001650 -
Accr7g00142 2232 Pfam QLQ 482 515 IPR014978 GO:0005524|GO:0005634|GO:0006355
Accr7g00142 2232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1566 IPR027417 -
Accr7g00142 2232 MobiDBLite consensus disorder prediction 2145 2162 - -
Accr7g00142 2232 Pfam SNF2-related domain 998 1302 IPR000330 GO:0005524|GO:0140658
Accr7g00142 2232 SMART bromo_6 1935 2044 IPR001487 GO:0005515
Accr7g00142 2232 FunFam ATP-dependent helicase BRM 1235 1445 - -
Accr7g00142 2232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 976 1225 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00142 Accr-Chr7 1676372 1688347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00142 1016 1461 RAD5 or RAD16-like Gene Family AT1G02670 25.670 1.23e-28 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Accr7g00142 SNF2_N 3.8e-65 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00142 K11647 - gmx:100793092 3180.58