Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00090 ATGGAGATTCCTCATCTAAACCGCCTCGCCCAACATTCCTCTTGGACAAGAGCGTATACTAGCATGAGGACTCAACCTCATCATATTGCAAAGGTTTTCTTTTGCCAGGCAAGAAATGATGGGTCATCAAAGTCGGTGCCTCCAACCCTGTTAGCAGCAGAAAAGGAAGAAGCAAAGGCTGTGTTAACCTTGTTTTTGAAGAAACAAGGCTTGAGTAATGCAGTTGCGGCAAGAACCATCAACAAGTCAGATGTGTTCATCGATCACCTTGTATCAAAGATCCACTCTAAACATAAATCTCGGTACCTCATAGGAAGAGAACTTACAACTCTTGAGATTAGAGATGCTTTGATTCCTTATCTTGAATCCCTTTTTGAAGAATATGGAGACATTTCGATGGATTTTGTGGAAAATTATCCAAACCCTCCTGTCAAGGAAAAGCCTACAGCACCAATTTCTATCCCTAGTTCATTGTTGGACTCGAAGAAGATGAAAGCGATGTCTCGAGTGAGTGAGATAGACCCAGCTGGCAAGCTTCGTCCTCATTTTGTCTATCTATTGGAGCTTGGCATGAGTATTGAGCAAATCAAGAGTATTACTCGAAAATTTCCGTCCTTTGCCTATTATAGCTTAGAAGGAAAAATTAGACCAGTTGTTGAGTTTCTTTTAGAACTTGGAGTTCCAAAAGAAGATATTCCCATCATTCTCACTAAAAGGCCTCAATTATGTGGTATCAGTCTCTCTGAGAATCTCAAACCCACCATGAAGTTCATGGAAACCTTGGGTATAGACAAGCAGCAATGGGCAAAGGTGATATACAGATTTCCAGCTCTTTTAACTTATAGCAAGCAAAAGGTGAAAACAAGTATAGATTTCCTCTATGAAATAGGTCTCTCAGAGGAGAACATAGGTAAGATCCTAACTCGCTTCCCCAATATTATCAGTTACAATGTGGAAGACAAGCTAAGACCAACAGCAAATTACTTTCGTTCCTTGGGAGTTGATGTTAGCATTCTTCTATTTCGATGTCCACAAAATTTTGGTCTTAGCATTGAGGCCAATCTAAAGCCTGTGACAGAATTTTTCTTAGAGAAGGGATACACAGTGCAGGAAGTTGGGACCATGATTTCAAGATATGGATCATTGTATACATTTAGCTTGGCTGATAACTTGATTCCAAAATGGGAATTCTTTGTGACCATGGACTACCCCAAACCAGAGCTGGTTAAGTTCCCTCAGTTTTTTGGTTACAGTTTGGAAGAGAGGATTAAACCAAGATATGCTCGAATGAAAGAGTGCAGAGTGACGCTGCTGCTAAACCAGCTTCTGTCTCTGTCAAGTAGTGACTTTGAGGAGGCCTTGAAAAAGAAAGTGAAGAAAAATCAGCTTGACGAGGATTCTAGTTGTAATGCCAAACGTGGTCAACCACCCAAGGAAAAATGA 1443 0.4061 MEIPHLNRLAQHSSWTRAYTSMRTQPHHIAKVFFCQARNDGSSKSVPPTLLAAEKEEAKAVLTLFLKKQGLSNAVAARTINKSDVFIDHLVSKIHSKHKSRYLIGRELTTLEIRDALIPYLESLFEEYGDISMDFVENYPNPPVKEKPTAPISIPSSLLDSKKMKAMSRVSEIDPAGKLRPHFVYLLELGMSIEQIKSITRKFPSFAYYSLEGKIRPVVEFLLELGVPKEDIPIILTKRPQLCGISLSENLKPTMKFMETLGIDKQQWAKVIYRFPALLTYSKQKVKTSIDFLYEIGLSEENIGKILTRFPNIISYNVEDKLRPTANYFRSLGVDVSILLFRCPQNFGLSIEANLKPVTEFFLEKGYTVQEVGTMISRYGSLYTFSLADNLIPKWEFFVTMDYPKPELVKFPQFFGYSLEERIKPRYARMKECRVTLLLNQLLSLSSSDFEEALKKKVKKNQLDEDSSCNAKRGQPPKEK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00090 480 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 197 228 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 304 335 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 269 299 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 PANTHER CGI-12 PROTEIN-RELATED 157 455 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 Gene3D Transcription termination factor 3, mitochondrial 238 461 IPR038538 -
Accr7g00090 480 Pfam mTERF 295 451 IPR003690 GO:0003690|GO:0006355
Accr7g00090 480 Pfam mTERF 189 365 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00090 Accr-Chr7 1077494 1110148 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr7g00090 mTERF 8.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00090 K15031 - qsa:O6P43_004791 687.182