Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00059 ATGTTAAGTACAGCCTCGTTACCGATAGCTCTACCAGATTCCGCCGCAGACTCCTCGCCCCTTCTTCGTTACTCGGTCTCCGATCAAGTGCTCCGAGGGACTTCGGGGTCATTACGGAGGGCGACGCAGTTCTTCCGGCGTGCGAGCGGGCGGCGGATGATGCTCCGGGAGCCGTCAGTGCGGGTGCGGGAGAACGCGGCGGAGCAGCTGGAGGCGCGTCAGAGTAACTGGGCGTTCTCGAAGCCGGTGGTGATACTGGATGTCTTTTGGAACTTGGTGTTTATGATTAGCGGGATTATCGTTTTAGGGTTGAGCGTTGAGGAGAAGCCTTCGGTGCCTTTGAGACTGTGGATTTGTGGGTACTTGCTTCAAGGTGTGTTTCACTGTGTGCGTGTGATTCTTAAGTACAGACGATACATGCAAGCCCAAGCACAAGCACAAGCACGTTCTGCGTCCGAAGAACAGCATCAGTTTGGGATCTCTTGGGAAAGAGGTTTAGATTTTAATTCTAGTTCTGGGAGTGATATTGGCGATTCTGCTGACGAACGGGATCAAGAAGGATATAGCATCAGAAAGCGCATGGAATCTGCAAATACAATGTTTTCATTCATATGGTGGCTTCTTGGATTTTATTGGATTACCACTGGTGGCCAGAGCTTGACCCAAGATGCTCCTCAGCTTTACTGGCTCTGTATCACCTTCCTTGCCATCGACATTGTGATTGTTTTGATATGTGTGGTCGTGGCATGCCTTGTTAGTATTGCTGTTTGCTGCTGTCTTCCATGCATACTTGCATTTTTGTCAGTGGTGGCGGATAAGGAAGGGGCAACCGTGGAAGAAATCAATCGGTTGCCAAAATACAAGTTCAGGAGCCCAGATGAATTTAGTGCTGATGATGATGGTGATGCCCAAGCTTCATGTTGTAAAGGAATAATGACAGAATGTGGCAGCGATACACCTGCAGAACATGCTCTTTCCAAGGAAGACGCGGAGTGCTGCATCTGCCTGTGTGCGTATGAGGATGGCGCTGAGCTAAGAGAACTTCCGTGCGGCCACCATTTTCACGCGGACTGCATCGACAAGTGGCTGATCATCAACGCTAACTGCCCTCTCTGCAAGTTCAATGTTCATACCGGAAACCATTCTCAAGTTTGA 1155 0.4996 MLSTASLPIALPDSAADSSPLLRYSVSDQVLRGTSGSLRRATQFFRRASGRRMMLREPSVRVRENAAEQLEARQSNWAFSKPVVILDVFWNLVFMISGIIVLGLSVEEKPSVPLRLWICGYLLQGVFHCVRVILKYRRYMQAQAQAQARSASEEQHQFGISWERGLDFNSSSGSDIGDSADERDQEGYSIRKRMESANTMFSFIWWLLGFYWITTGGQSLTQDAPQLYWLCITFLAIDIVIVLICVVVACLVSIAVCCCLPCILAFLSVVADKEGATVEEINRLPKYKFRSPDEFSADDDGDAQASCCKGIMTECGSDTPAEHALSKEDAECCICLCAYEDGAELRELPCGHHFHADCIDKWLIINANCPLCKFNVHTGNHSQV 384
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00059 384 SUPERFAMILY RING/U-box 325 378 - -
Accr7g00059 384 SMART ring_2 332 372 IPR001841 -
Accr7g00059 384 ProSiteProfiles Zinc finger RING-type profile. 332 373 IPR001841 -
Accr7g00059 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 382 IPR013083 -
Accr7g00059 384 Pfam Ring finger domain 331 373 IPR001841 -
Accr7g00059 384 PANTHER TARGET OF ERK KINASE MPK-1 48 379 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr7g00059 Accr-Chr7 738313 741329 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00059 12 383 C3H Transcription Factor Family AT1G68070 43.432 7.60e-103 306
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00059 - - qsa:O6P43_027190 433.721