Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00054 ATGAGTTTTGTGGGTTTTCCAGATATTGCTCATTACAACAGCAGCGATTCTTGTAGAATGCCCAAAGGTGTAATCTCACAGCCTCGCCTTCTCACTTCCACTCCCACAGCTAAAACCATGTTCAACTCTCCTGGCCTCTCACTTGCCCTTACGGATATAGATGGGCAGAGGGATGGGAATAGAATGTGTGAGAATTACGAGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGGAAGTGATAACTTGGATGTTGCTTCCGGCGACGATCAAGACGCCTCCGATCACCCACCCAGGAAAAAGCGCTACCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCACTGTTCAAGGAGTGTCCACACCCGGATGAGAAGCAGAGATTGGAACTGAGCAAGAGGCTTTGTTTGGAGACAAGGCAAGTTAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTGGAACGCCATGAGAATACACTGCTCAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATTTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCGGCTATAATTGGAGAAATTTCACTCGAGGAACAGCATCTTCGGGTGGAAAATGCCCGGTTAAAGGACGAACTAGACCGGGTTTGTGCCCTCGCCGGCAAGTTCCTCGGCCGCCCGGTTTCTTCTTACCCCAACTCAATGGCTCCTCCATTGGCAAACTCAAGTTTGGAGCTTGGAGTTGGAAGCAATGGATTTGGTGGTATAAGCACTGTGCCTGCAACACTGCCCGTTGGGCCTGACTTGGGTGTGGGTATTTCTAGCCCTTTAGCTATGGGAACTCCTCCTCATCCCGCCGCGGTCAGCTCCGGGTCAACAGAGAGGTCAATGTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCACAGACTAGTGAGCCTCTATGGATGACTAGTTTGGAAGGTGGAAGAGAAATCCTGAACCATGAGGAGTACTCAAGGAGTTTCACACCTTGCATTGGCTTAAAACCTAATGGCTTTGTGTCTGAAGCGTCAAGGGAGACTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTTTGATGGACTCGAACCGTTGGGCAGAGATGTTTCCATGTATAATTGCAAGAACTTCCCCTCCTGAAGTAATATGTGGCGGAATAAATGGGACCAGAAATGGTGCTCTTCAACTAATGCATGGTGAGCTGCAAGTACTATCGCCGTTGGTGCCGGTTCGGGAGGTGAGTTTCCTGAGGTTCTGCAAGCAGCATGCGGAGGGAGTGTGGGCTGTTGTGGATGTGTCAGTCAGGGAAAGTTGTGGTTCATCACCTTTTGTGAACTGTAGGAGGCTTCCTTCGGGCTGTCTCGTTCAAGACATGCCGAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAAAGGCAAGTTCACGAGCTGTATAGGGGCTTGTTAAGTTCAGGCTTGGGTTTTGGCGCCCAACGCTGGCTTGCCACCCTCCAGCGTCAATGCGAATGCCTCGCCATTTTAATGTCATCCTCGCGAGACCATTCTGCGATTACTGCCGGCGGGCGGCGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGCATTTGTGCCTCCACCGTGCATAAGTGGAACAAGCTTAATGCGGGCAACGTTGGTGAGGATGTCCGGGTCATGACTCGCAAGAGCGTCGACGACCCAGGGGAACCGCCGGGGGTCGTGCTGAGCGCTGCCACGTCGGTGTGGTTGCCGGTATCGCCGCAGCGACTGTTCGATTTCCTACGCGACGATGGGCTCCGGAGCGAGTGGGACATACTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCATGACCACGGCAATTGCGTCTCCCTCCTCAGAGCCAGCGCAATGAATTCCAGCCAGAGCAGCATGCTCATATTGCAGGAGACATGCATCGACACGTCGGGGGCGCTCGTGGTATACGCGCCGGTGGATATTCCGGCCATGCACCTGGTCATGAACGGTGGCGATTCAGCCTACGTGGCGTTACTCCCGTCGGGGTTCGTCATTGTGCCAGACGGGTCTAGTTCACGAGGGTCGCAGAGCCACAGCAACGGCGGCAGAGGGAGCGGGTCACTCCTGACGGTGGCGTTTCAGATACTGGTGAATAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCGGTGGAGACGGTGAACAACCTCATATCTTGTACGGTGCAGAAGATAAAGGCCGCGCTTCCATGTGAAAGCTGA 2373 0.5293 MSFVGFPDIAHYNSSDSCRMPKGVISQPRLLTSTPTAKTMFNSPGLSLALTDIDGQRDGNRMCENYEMNVNGRRSREEEQESRSGSDNLDVASGDDQDASDHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENISIRDAMRNPICSNCGGPAIIGEISLEEQHLRVENARLKDELDRVCALAGKFLGRPVSSYPNSMAPPLANSSLELGVGSNGFGGISTVPATLPVGPDLGVGISSPLAMGTPPHPAAVSSGSTERSMFLELALAAMDELVKMAQTSEPLWMTSLEGGREILNHEEYSRSFTPCIGLKPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCIIARTSPPEVICGGINGTRNGALQLMHGELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSVRESCGSSPFVNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHELYRGLLSSGLGFGAQRWLATLQRQCECLAILMSSSRDHSAITAGGRRSMLKLAQRMTNNFCAGICASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDDGLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAMNSSQSSMLILQETCIDTSGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFVIVPDGSSSRGSQSHSNGGRGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCES 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00054 790 Coils Coil 157 184 - -
Accr7g00054 790 FunFam Homeobox-leucine zipper protein GLABRA 2 312 532 - -
Accr7g00054 790 SMART START_1 312 533 IPR002913 GO:0008289
Accr7g00054 790 Pfam Homeodomain 106 161 IPR001356 GO:0003677
Accr7g00054 790 Gene3D - 92 179 - -
Accr7g00054 790 ProSitePatterns 'Homeobox' domain signature. 138 161 IPR017970 GO:0000981|GO:0006355
Accr7g00054 790 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 102 786 IPR042160 -
Accr7g00054 790 SUPERFAMILY Homeodomain-like 91 163 IPR009057 -
Accr7g00054 790 Pfam START domain 312 533 IPR002913 GO:0008289
Accr7g00054 790 SUPERFAMILY Bet v1-like 306 533 - -
Accr7g00054 790 ProSiteProfiles 'Homeobox' domain profile. 103 163 IPR001356 GO:0003677
Accr7g00054 790 ProSiteProfiles START domain profile. 303 536 IPR002913 GO:0008289
Accr7g00054 790 SMART HOX_1 104 167 IPR001356 GO:0003677
Accr7g00054 790 MobiDBLite consensus disorder prediction 67 113 - -
Accr7g00054 790 CDD homeodomain 105 163 IPR001356 GO:0003677
Accr7g00054 790 MobiDBLite consensus disorder prediction 70 85 - -
Accr7g00054 790 SUPERFAMILY Bet v1-like 558 783 - -
Accr7g00054 790 FunFam Homeobox-leucine zipper protein HDG1 93 179 - -
Accr7g00054 790 CDD START_ArGLABRA2_like 307 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00054 Accr-Chr7 706229 711828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00054 35 790 Homeobox Transcription Factor Family AT3G61150 66.709 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr7g00054 START 9.5e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00054 K09338 - qsa:O6P43_017565 1283.09