Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00053 ATGAGTTTTGTGGGTTTTCCAGATATTGCTCATTACAACAGCAGCGATTCTTGTAGAATGCCCAAAGGTGTAATCTCACAGCCTCGCCTTCTCACTTCCACTCCCACAGCTAAAACCATGTTCAACTCTCCTGGCCTCTCACTTGCCCTTCAGACGGATATAGATGGGCAGAGGGATGGGAATAGAATGTGTGAGAATTACGAGATGAATGTTAATGGGAGACGAAGCAGAGAAGAAGAGCAAGAAAGCAGATCTGGAAGTGATAACTTGGATGTTGCTTCCGGCGACGATCAAGACGCCTCCGATCACCCACCCAGGAAAAAGCGCTACCACCGACACACCCCTCAACAGATACAAGAGCTTGAAGCACTGTTCAAGGAGTGTCCACACCCGGATGAGAAGCAGAGATTGGAACTGAGCAAGAGGCTTTGTTTGGAGACAAGGCAAGTTAAATTTTGGTTCCAGAATAGAAGAACTCAGATGAAGACCCAATTGGAACGCCATGAGAATACACTGCTCAGGCAAGAGAATGACAAGCTTAGAGCTGAGAACATTTCCATTAGGGACGCCATGAGGAACCCCATTTGCTCAAACTGTGGGGGACCGGCTATAATTGGAGAAATTTCACTCGAGGAACAGCATCTTCGGGTGGAAAATGCCCGGTTAAAGGACGAACTAGACCGGGTTTGTGCCCTCGCCGGCAAGTTCCTCGGCCGCCCGGTTTCTTCTTACCCCAACTCAATGGCTCCTCCATTGGCAAACTCAAGTTTGGAGCTTGGAGTTGGAAGCAATGGATTTGGTGGTATAAGCACTGTGCCTGCAACACTGCCCGTTGGGCCTGACTTGGGTGTGGGTATTTCTAGCCCTTTAGCTATGGGAACTCCTCCTCATCCCGCCGCGGTCAGCTCCGGGTCAACAGAGAGGTCAATGTTTCTAGAGCTTGCTTTGGCTGCCATGGATGAGTTGGTGAAGATGGCACAGACTAGTGAGCCTCTATGGATGACTAGTTTGGAAGGTGGAAGAGAAATCCTGAACCATGAGGAGTACTCAAGGAGTTTCACACCTTGCATTGGCTTAAAACCTAATGGCTTTGTGTCTGAAGCGTCAAGGGAGACTGGAATGGTCATCATAAACAGCTTGGCCCTTGTTGAAACTTTGATGGACTCGAACCGTTGGGCAGAGATGTTTCCATGTATAATTGCAAGAACTTCCCCTCCTGAAGTAATATGTGGCGGAATAAATGGGACCAGAAATGGTGCTCTTCAACTAATGCATGGTGAGCTGCAAGTACTATCGCCGTTGGTGCCGGTTCGGGAGGTGAGTTTCCTGAGGTTCTGCAAGCAGCATGCGGAGGGAGTGTGGGCTGTTGTGGATGTGTCAGTCAGGGAAAGTTGTGGTTCATCACCTTTTGTGAACTGTAGGAGGCTTCCTTCGGGCTGTCTCGTTCAAGACATGCCGAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATACGATGAAAGGCAAGTTCACGAGCTGTATAGGGGCTTGTTAAGTTCAGGCTTGGGTTTTGGCGCCCAACGCTGGCTTGCCACCCTCCAGCGTCAATGCGAATGCCTCGCCATTTTAATGTCATCCTCGCGAGACCATTCTGCGATTACTGCCGGCGGGCGGCGGAGCATGCTGAAGCTAGCGCAGCGCATGACTAACAACTTTTGCGCCGGCATTTGTGCCTCCACCGTGCATAAGTGGAACAAGCTTAATGCGGGCAACGTTGGTGAGGATGTCCGGGTCATGACTCGCAAGAGCGTCGACGACCCAGGGGAACCGCCGGGGGTCGTGCTGAGCGCTGCCACGTCGGTGTGGTTGCCGGTATCGCCGCAGCGACTGTTCGATTTCCTACGCGACGATGGGCTCCGGAGCGAGTGGGACATACTGTCGAACGGTGGGCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCATGACCACGGCAATTGCGTCTCCCTCCTCAGAGCCAGCGCAATGAATTCCAGCCAGAGCAGCATGCTCATATTGCAGGAGACATGCATCGACACGTCGGGGGCGCTCGTGGTATACGCGCCGGTGGATATTCCGGCCATGCACCTGGTCATGAACGGTGGCGATTCAGCCTACGTGGCGTTACTCCCGTCGGGGTTCGTCATTGTGCCAGACGGGTCTAGTTCACGAGGGTCGCAGAGCCACAGCAACGGCGGCAGAGGGAGCGGGTCACTCCTGACGGTGGCGTTTCAGATACTGGTGAATAGCCTGCCGACGGCGAAGCTGACGGTAGAGTCGGTGGAGACGGTGAACAACCTCATATCTTGTACGGTGCAGAAGATAAAGGCCGCGCTTCCATGTGAAAGCTGA 2376 0.5295 MSFVGFPDIAHYNSSDSCRMPKGVISQPRLLTSTPTAKTMFNSPGLSLALQTDIDGQRDGNRMCENYEMNVNGRRSREEEQESRSGSDNLDVASGDDQDASDHPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENTLLRQENDKLRAENISIRDAMRNPICSNCGGPAIIGEISLEEQHLRVENARLKDELDRVCALAGKFLGRPVSSYPNSMAPPLANSSLELGVGSNGFGGISTVPATLPVGPDLGVGISSPLAMGTPPHPAAVSSGSTERSMFLELALAAMDELVKMAQTSEPLWMTSLEGGREILNHEEYSRSFTPCIGLKPNGFVSEASRETGMVIINSLALVETLMDSNRWAEMFPCIIARTSPPEVICGGINGTRNGALQLMHGELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSVRESCGSSPFVNCRRLPSGCLVQDMPNGYSKVTWVEHAEYDERQVHELYRGLLSSGLGFGAQRWLATLQRQCECLAILMSSSRDHSAITAGGRRSMLKLAQRMTNNFCAGICASTVHKWNKLNAGNVGEDVRVMTRKSVDDPGEPPGVVLSAATSVWLPVSPQRLFDFLRDDGLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAMNSSQSSMLILQETCIDTSGALVVYAPVDIPAMHLVMNGGDSAYVALLPSGFVIVPDGSSSRGSQSHSNGGRGSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALPCES 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00053 791 MobiDBLite consensus disorder prediction 71 86 - -
Accr7g00053 791 SMART START_1 313 534 IPR002913 GO:0008289
Accr7g00053 791 Pfam Homeodomain 107 162 IPR001356 GO:0003677
Accr7g00053 791 ProSiteProfiles START domain profile. 304 537 IPR002913 GO:0008289
Accr7g00053 791 ProSitePatterns 'Homeobox' domain signature. 139 162 IPR017970 GO:0000981|GO:0006355
Accr7g00053 791 Gene3D - 93 180 - -
Accr7g00053 791 Coils Coil 158 185 - -
Accr7g00053 791 SUPERFAMILY Homeodomain-like 92 164 IPR009057 -
Accr7g00053 791 SUPERFAMILY Bet v1-like 307 534 - -
Accr7g00053 791 FunFam Homeobox-leucine zipper protein GLABRA 2 313 533 - -
Accr7g00053 791 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 103 787 IPR042160 -
Accr7g00053 791 CDD homeodomain 106 164 IPR001356 GO:0003677
Accr7g00053 791 SMART HOX_1 105 168 IPR001356 GO:0003677
Accr7g00053 791 CDD START_ArGLABRA2_like 308 533 - -
Accr7g00053 791 FunFam Homeobox-leucine zipper protein HDG1 94 180 - -
Accr7g00053 791 Pfam START domain 313 534 IPR002913 GO:0008289
Accr7g00053 791 SUPERFAMILY Bet v1-like 559 784 - -
Accr7g00053 791 ProSiteProfiles 'Homeobox' domain profile. 104 164 IPR001356 GO:0003677
Accr7g00053 791 MobiDBLite consensus disorder prediction 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00053 Accr-Chr7 706229 711828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00053 35 791 Homeobox Transcription Factor Family AT3G61150 66.837 0.0 1011
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr7g00053 START 9.5e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00053 K09338 - qsa:O6P43_017565 1285.4