Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00047 ATGGGTAGAGGGAGGGTTGAACTGAAGATGATAGAGAACAAAATCAACAGGCAAGTGACTTTCTCCAAAAGAAGGAACGGCCTCATGAAGAAAGCTCATGAACTGTCTGTGCTTTGTGATGCTGAGGTTGCTCTCATTATTTTCTCTGGTCGTGGCAAGCTCTATGAATTCGGCAGTGCTGGCATTAGTAAAACCCTGGAACGATACCAGAGGTGCACTTTGACTTCTCAGGAGCCCAATATTGTTGAGCTTGAAACCCAGAGCTGGTGCGAAGAGTTGGCAAAACTAAGGGCAAAGTATGAGTCACTTCAGAGGACTCAAAGGCATTTGCTGGGGGAAGATTTAGGGCCACTGAGTGGGAAAGAGCTTCAGGATCTAGAGAAGCAGCTTGAAAGAGCCCTGGCCCAAGCAAGGCAAAGGAAGACGGAGATAATGATAGAAGAAATGGAAAATCTACGCAGAAAGGAACGGGATCTGGGAAACATGAATGAGCAGCTGAAACAGAGGGTTGTAAAAACCTTAGACACCTTCTGGAACTACCCTTCTCATCATTCTCACTCTCACTCCTCTGCGGCCAACCCCGACAACAACTCTCTCCCCCACCCTAACCCTCTCCTCGATTCCCTCCATATTGGCTACCATCATCACCATGAGTATGCTGAAGCAGAGACATCTAATCATCATGCTCACAACTTCATGCAGGGATGGCTCCTTTGA 717 0.4742 MGRGRVELKMIENKINRQVTFSKRRNGLMKKAHELSVLCDAEVALIIFSGRGKLYEFGSAGISKTLERYQRCTLTSQEPNIVELETQSWCEELAKLRAKYESLQRTQRHLLGEDLGPLSGKELQDLEKQLERALAQARQRKTEIMIEEMENLRRKERDLGNMNEQLKQRVVKTLDTFWNYPSHHSHSHSSAANPDNNSLPHPNPLLDSLHIGYHHHHEYAEAETSNHHAHNFMQGWLL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00047 238 Coils Coil 120 169 - -
Accr7g00047 238 CDD MADS_MEF2_like 2 73 IPR033896 GO:0000977|GO:0045944
Accr7g00047 238 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr7g00047 238 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 193 - -
Accr7g00047 238 MobiDBLite consensus disorder prediction 182 202 - -
Accr7g00047 238 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 Coils Coil 86 113 - -
Accr7g00047 238 FunFam MADS-box transcription factor 1 13 83 - -
Accr7g00047 238 Pfam K-box region 85 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Accr7g00047 238 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 57 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 SUPERFAMILY SRF-like 2 89 IPR036879 GO:0003677|GO:0046983
Accr7g00047 238 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Accr7g00047 238 Gene3D - 13 82 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00047 Accr-Chr7 654318 657714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00047 1 238 MADS-box Gene Family AT2G45650 56.371 1.80e-92 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Accr7g00047 K-box 2.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00047 K09264 - rcu:8258483 283.108