Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00021 ATGTTGGGCTCAAACACCAATTTGGTGACCACGGTGATTGGATTTGGTATGAGTGCCACTTTTATTGTCTTTGTCTGTACAAGAATAATCTGTGGAAGGTTGCGAGCCTCCTCCCATTCTCATAATATGCTTGAATTTGAGCCTAGGATGGACATAGAACAGCCAGAAAATATTGTTAACCGCCCGGAACCTGTTCTTGTTACCGCAATTCCCACCATGAAGTTCGATCGAGAGGCTTTCAGTTCTATTGAAAATACACAGTGCGTGATATGTTTGGCAGAGTACAAAGAAAGAGAGGTACTGCGCATCATGCCAAAATGTGGTCATAGCTTCCATCTTTCTTGCATTGATATATGGCTGAGGAAACAATCCACCTGCCCGGTATGCCGTCTTCCATTGCAGAATTCTTCTGAAACAAAGCACGTGAGACCGGTAACGTACAGCTTGGGGCAAGGTGAGTCTCAGACTTCTGAAAGTAGAGACAGTGAGAGGAATATTGAGCCTGTGCCTGGGAATAATCCCTCGCCCTTGCGCCAATCACATGCTGCAGAAGCAGAAACAAGGCAGTGA 570 0.4561 MLGSNTNLVTTVIGFGMSATFIVFVCTRIICGRLRASSHSHNMLEFEPRMDIEQPENIVNRPEPVLVTAIPTMKFDREAFSSIENTQCVICLAEYKEREVLRIMPKCGHSFHLSCIDIWLRKQSTCPVCRLPLQNSSETKHVRPVTYSLGQGESQTSESRDSERNIEPVPGNNPSPLRQSHAAEAETRQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00021 189 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 140 IPR013083 -
Accr7g00021 189 MobiDBLite consensus disorder prediction 166 182 - -
Accr7g00021 189 MobiDBLite consensus disorder prediction 140 156 - -
Accr7g00021 189 PANTHER OS11G0150450 PROTEIN 1 165 - -
Accr7g00021 189 Pfam Ring finger domain 87 130 IPR001841 -
Accr7g00021 189 CDD RING-H2_EL5-like 87 130 - -
Accr7g00021 189 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Accr7g00021 189 MobiDBLite consensus disorder prediction 140 189 - -
Accr7g00021 189 SMART ring_2 88 129 IPR001841 -
Accr7g00021 189 SUPERFAMILY RING/U-box 79 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00021 Accr-Chr7 314091 315849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00021 8 133 C3H Transcription Factor Family AT1G72220 30.534 3.85e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00021 - - ccaj:109802319 268.855