Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00020 ATGGCAGGAGGTGGAAGTAAGAAATCTGCTTCTGCAACTACGTCGTCGCCTTCATCATCAAAAAATGACAATCAGCATCCAGCACAATCCAACAACAAGGCCACCGTGATCAAACGGTTCATAGGGGTCCGGCAGAGGCCGTCGGGACGATGGGTCGCCGAGATCAAGGACTCAGCTCAGCATGTCCGCCTCTGGCTCGGAACCTACGACACCCCAGAGGAGGCCGCCCAGGCCTACGACGAGGCAGCCCGGGCCCTCCGCGGCGACAACGCCCGAACCAACTTCGCCTCCTCCACCACTGCCACGGCCACCAACGAAGGCCTATCGAAGCAAAGTGGACTGAGTTTTGCTTCTCTGAAAGCCAAGCTGAGCAAGAATCTTCAGAGCATAATGGCTAGAGCCAGCGATGGCAGCAGCAGTAATAAAGCATCCAAGAGCAGGGTGACTGACCATTTTACCCTTGCCAGCATATTCCACAGAAGGACTAGCTCTAATAACTACGGGCACTACAAGTTCAGCCAAATTCCTAATGATATGGTGGAGAAAGTGGTGCAGCCCAGTATAATAGTGCCACCTGTAGGGGATCTACCCGGTGCAGTTAGTTCGTGGGAGAGCTCAAGCGTATCAGATTGTAGCTCCGAGTGGGTCGGGTTCCGGCAACCTGGTTTGGACTCGGACGGGTCAGACGCCGGGGAGCAACCAGGGCTTAATTTGGAGCAGCTGTTGGGTTGGGTGGATGGTCCGGATCGTGGTATTAACAATGTGTATGGAAGCAGGTTGATAAATGGAAGCGATGAACAAGATGAAGGATCGAGGAGCAAGAGGTTTAAGGTTTCTTCTTCAGTTCTTGTGCCTCCAATTTTCAGTGGCTCTCCAAATAACAATGAATATGGGTCTCCTTACCATTACAGCAGTGCTTATGGATCTCCATATAATGATATTGGCGGCAAGTGA 954 0.522 MAGGGSKKSASATTSSPSSSKNDNQHPAQSNNKATVIKRFIGVRQRPSGRWVAEIKDSAQHVRLWLGTYDTPEEAAQAYDEAARALRGDNARTNFASSTTATATNEGLSKQSGLSFASLKAKLSKNLQSIMARASDGSSSNKASKSRVTDHFTLASIFHRRTSSNNYGHYKFSQIPNDMVEKVVQPSIIVPPVGDLPGAVSSWESSSVSDCSSEWVGFRQPGLDSDGSDAGEQPGLNLEQLLGWVDGPDRGINNVYGSRLINGSDEQDEGSRSKRFKVSSSVLVPPIFSGSPNNNEYGSPYHYSSAYGSPYNDIGGK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00020 317 MobiDBLite consensus disorder prediction 286 317 - -
Accr7g00020 317 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 180 - -
Accr7g00020 317 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Accr7g00020 317 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Accr7g00020 317 FunFam ethylene-responsive transcription factor RAP2-11 38 97 - -
Accr7g00020 317 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Accr7g00020 317 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Accr7g00020 317 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Accr7g00020 317 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Accr7g00020 317 MobiDBLite consensus disorder prediction 286 306 - -
Accr7g00020 317 MobiDBLite consensus disorder prediction 7 35 - -
Accr7g00020 317 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Accr7g00020 317 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Accr7g00020 317 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00020 Accr-Chr7 298744 299697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00020 39 97 AP2-EREBP Transcription Factor Family AT5G19790 71.186 2.85e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr7g00020 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00020 K09286 - pcin:129290888 325.094