Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g00017 ATGGTGGTTGAAGATAATAAGCATGATGATGGTCGTTCAACAGAAGAATGGCTGTTTCAAGCACAAGAGCTTGTCCCTCTTTCTCTCGACAAGGCCAAGGAGGTTAAGAATTTCCCAGGGAGGTGGAAGATGATCATATCAAAACTTGAACAGATCCCGACTCGTTTGTCAGACTTATCTAGCCATCCATGCTTCTCCAAGAACGCTCTCTGCAAGGAGCAATTGCAAGCTGTCTCATCAATACTCAGAGAAGCCATTCATTTGGCAGAGCTTTGCGTGATGGACAAGTATGAAGGCAAGCTCAAGATGCAGAGTGATCTCGATGCCTTATCAGGAAAACTCGATTTGCACTTGAAAGATTGCAGCCTGTTGATCAAAACTGGAGTTCTCGGGGAGGCCACTCTGCCATTACCAATATCATCAGAGGTTGATGTTTCAAGCAATATCAGGGAGTTACTGGCTCGCCTGCAGATCGGTCACTTGGAGGCGAAACACAGGGCTATAGAGAAACTACATGATGTGATGAAAGACGACGAGAAGAGTGTTTTAGCAGTTTTAACACGTAGCAGCATTGCTGCTTTGGTTCAATTGCTCACTGCTACTTCTCCGAGGATAAGAGAGAAAACTGCCTCCATTATATGCAGTCTTGCAGAATCCGGAAGCTGTGAGAACTGGTTAGTTTCTGAAGGAGTTATTCCACCTCTAATAAGGCTCATTGAATCAGGAAGCGCCATCGGGAAAGAGAAGGCCTCCATAACCTTCCAGAGGCTGTCCATGTCATCAGAAACTGCTCGTGCCATTGTTGGACATGGCGGGGTGCGTCCAGTCATTGATCTCTGTCAGACTGGTGATTCTGTGTCACAGGCTGCTTGTGCTTGCACTTTGAAGAACATATCTGCTGTCCCCGAGGTTCGACAAGTTCTAGCCGAGGAAGGGATTGTTAAGGTAATGATCAGCCTTCTAAACTGTGGAATGTTGTTGAATTCCAAAGAGTATGCAGCTGAGTGCCTGCAGAACCTCACTTCAAGCAATGAGAATCTAAGAAGGCTTGTCATATCAGAAAATGGAATAAGAAGCCTTTTAGCTTATTTAGATGTTCCTCTTCCACAAGAGTCTTCAATGGGAGCCTTGAGGAACTTGGTAGGGTCTGTCTCTGAGCAATCTCTAGTTTCAATGGGTCTGCTTCCTCGCTTGGCTCATGTCCTACAATCCGGGTCCATCGGGGCCCAACAAGCTGCTGCTTCCACAATCTGTAAAGTCTGCGGCTCAGGAGAGATGAAGAAGATGATTGGTGATGCCGGGTGCGTGCCTGTGCTGGTGAAAATGCTGGAGGCCAAGTCTAATGGTGCAAGAGAGGTGGCTGCGCAAGCGGTTTCAAGCTTGATGGTGCTGTCTCAGAATCAAAGGGAGGTGAAGAAGAATGACAAGAGTGTGCCTAACCTTGTTCAATTGCTTGATCCAAATCCTCAAAATACTGCAAAGAAATATGCTGTGGCATGCCTTGGATCGCTTTCTTCGTGTCACAAGTGTAGGAAACTGATGATCTCCTATGGAGCAATCGGCTATCTGAAGAAGCTCATTGAGATGGACATACCGGGAGCCAAGAAGCTACTTGAGAGATTGGAAAGAGGGAAATTGAGAAGCTTGTTTAGCAGGAAATAA 1662 0.4633 MVVEDNKHDDGRSTEEWLFQAQELVPLSLDKAKEVKNFPGRWKMIISKLEQIPTRLSDLSSHPCFSKNALCKEQLQAVSSILREAIHLAELCVMDKYEGKLKMQSDLDALSGKLDLHLKDCSLLIKTGVLGEATLPLPISSEVDVSSNIRELLARLQIGHLEAKHRAIEKLHDVMKDDEKSVLAVLTRSSIAALVQLLTATSPRIREKTASIICSLAESGSCENWLVSEGVIPPLIRLIESGSAIGKEKASITFQRLSMSSETARAIVGHGGVRPVIDLCQTGDSVSQAACACTLKNISAVPEVRQVLAEEGIVKVMISLLNCGMLLNSKEYAAECLQNLTSSNENLRRLVISENGIRSLLAYLDVPLPQESSMGALRNLVGSVSEQSLVSMGLLPRLAHVLQSGSIGAQQAAASTICKVCGSGEMKKMIGDAGCVPVLVKMLEAKSNGAREVAAQAVSSLMVLSQNQREVKKNDKSVPNLVQLLDPNPQNTAKKYAVACLGSLSSCHKCRKLMISYGAIGYLKKLIEMDIPGAKKLLERLERGKLRSLFSRK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g00017 553 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 551 - -
Accr7g00017 553 Gene3D - 388 536 IPR011989 -
Accr7g00017 553 SMART arm_5 464 506 IPR000225 GO:0005515
Accr7g00017 553 SMART arm_5 383 422 IPR000225 GO:0005515
Accr7g00017 553 SMART arm_5 260 300 IPR000225 GO:0005515
Accr7g00017 553 SMART arm_5 301 342 IPR000225 GO:0005515
Accr7g00017 553 SMART arm_5 177 218 IPR000225 GO:0005515
Accr7g00017 553 SMART arm_5 343 382 IPR000225 GO:0005515
Accr7g00017 553 SMART arm_5 423 463 IPR000225 GO:0005515
Accr7g00017 553 Gene3D - 120 387 IPR011989 -
Accr7g00017 553 Pfam Armadillo/beta-catenin-like repeat 425 461 IPR000225 GO:0005515
Accr7g00017 553 Pfam Armadillo/beta-catenin-like repeat 261 300 IPR000225 GO:0005515
Accr7g00017 553 SUPERFAMILY ARM repeat 148 533 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g00017 Accr-Chr7 254650 256311 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g00017 303 529 U-box Gene Family AT2G23140 28.448 1.85e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g00017 - - gmx:100789140 860.136