Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01778 ATGGAGTTCCACAAACTCGAAACCCCCAAAACTAACAGTGACCATGTTGTCATCAACATGGATCTTCAACAACAAAGCCCAAACCCTAAACAAGATCATAATTCTCCTCAACCCTATGCTCATCCCAGATACATAACACTACAACGCCTCAATTTCTCCAAACCAAAATCACGTTTTGAGGAGATTAACTACCCAATCTCAACACCAAAACCAACTTACAATCCCATCCCAGAATCCAATGATCACCAACCAGCAGAAAACCGTACTAACTACTCTTCCGACGACGACGACGACGACGAAGAATGGTTCGAGAACTTGGACGAGTATGGCTGCAATGACGATGAGGAAGCCGCCGGAAAGTGTAGAAAGAAGAGGAAACAAAAGATCAACAAGAGAGCTTTACTTGAATGGGCTTTGTTTCTCATCATCATTACTTGCCTGATATGTTCTCTCACTATCAAATCCCTCAAGCTTAAGACTCAGTGGGGCCTACAAATCTGGAATTGGTGCTTGTTGGTGATGGTAATCTTCTGTGGCCGACTAGTCTCCGAATGGGTAGTCCGAATCCTCGTGTTTCTCATTGAACGAAACTTCATGTTGAGAGAGAAAGTACTCTACTTCGTGTATGGTCTTCGAAAGAGTTTTCAGAACTGTGTATGGCTAGCCCTAGTTTTAATCGCATGGATGATTATGTTCCACGACGCTCATAATAAAAACAAAGTCCTCAAGAAGTTCTTTAGGGCTCTCGTTGCAATCCTCGTCGGCGCAACCATATGGTTAATAAAAATAGTGCTCGTTAAGGTTCTGGCGTCGTCGTTTCATGTGGCGGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTTCATCACTATGTGTTAGAGGCGCTGTCGGGGCCGCCGTTGGACGAGGAGGAGATGGACCTGCCAAGGCGGCACTTGCAGGAGTCGAAGTCGTTGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCAGTTGAAGTCGAGGTCGAAGAAGGGAGATGGGTCAAGGAGGATTGATATAGAGAAGCTCAAGAGGCTGAGCATGGAAGGGAGAGCCACGGCGTGGAGCGTGAAGAGGTTGGTGAGCTACGTGATGTCGTCGGGGTTGTCGACGATTACGAGGACGGTGGACGATTTTGCTGACGCCGAGTCGGAGATTAATAGTGAGTGGCAGGCTAGGAGTTGTGCTCAGAGGATATTCAAGAATGTTGCAAAGGAAGGATCCAAGTACATAGTAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTGTACATGACATTTCCCTTATTTGGAGGAGCAATTGAAACTGGAAAAATTACCAAGTCCTCATTCCGAAATTGGGTGGTACAAGCGTACGTAGAGAGAAAAGCATTGGCTCATTCATTGAACGATACAAAAACGGCAGTGCGTCAACTTCACAAACTGGCTAGTGCAATAGTAATAGTGATAATATCAGTGGGGTCTCTCTTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTCGTCGTCATTTCTCAATTGTTGCTCGTAGGTTTTGTGTTCCAAAACATGTGCAAAACGGTCTTTGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTCGATGTCGGAGATCGTTGTGTCATTGATCGCATTCAGATGATTGTAGAGGAGATGAATATATTGACAACAGTGTTCTTAAGATATGATGGCGAGAAAATATATTATCCAAATTCGGTTCTTTTGACGAAACCTATAAGCAATTTCAGAAGAAGCCCAGATATGGGTGACGTCGTTGAATTCACTGTTGACGCCTCTACCTCCATGGACAATATCACTTCCCTCAAGAAGGCCATTCAAACGTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACACGTAGTGAAAGTAAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTCCGTTCGACACACCATTAACTATCAAAACTTTGGCGAGCGGAATAGCCGGCGATCAGAGCTTTTGCTCGAGCTAAAGAAGATCTTTGAGAGCCTCGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACACAGGTTAACATTGGCAACAATAATGGAGCCTTCCCACTTGAATCTTCATAA 2142 0.4454 MEFHKLETPKTNSDHVVINMDLQQQSPNPKQDHNSPQPYAHPRYITLQRLNFSKPKSRFEEINYPISTPKPTYNPIPESNDHQPAENRTNYSSDDDDDDEEWFENLDEYGCNDDEEAAGKCRKKRKQKINKRALLEWALFLIIITCLICSLTIKSLKLKTQWGLQIWNWCLLVMVIFCGRLVSEWVVRILVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHNKNKVLKKFFRALVAILVGATIWLIKIVLVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEEEMDLPRRHLQESKSLPARLRYEKSQQLKSRSKKGDGSRRIDIEKLKRLSMEGRATAWSVKRLVSYVMSSGLSTITRTVDDFADAESEINSEWQARSCAQRIFKNVAKEGSKYIVEEDLLRFLKRDEVYMTFPLFGGAIETGKITKSSFRNWVVQAYVERKALAHSLNDTKTAVRQLHKLASAIVIVIISVGSLLVMGLATTKVIFVVISQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIDRIQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMGDVVEFTVDASTSMDNITSLKKAIQTYIESKPKYWNPKHVVKVKEIENMDKMKMALSVRHTINYQNFGERNSRRSELLLELKKIFESLGIKYRLLPQEVHLTQVNIGNNNGAFPLESS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01778 713 SUPERFAMILY Sm-like ribonucleoproteins 530 589 IPR010920 -
Accr6g01778 713 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 23 699 IPR016688 -
Accr6g01778 713 MobiDBLite consensus disorder prediction 63 98 - -
Accr6g01778 713 MobiDBLite consensus disorder prediction 67 87 - -
Accr6g01778 713 Pfam Mechanosensitive ion channel 481 686 IPR006685 GO:0016020|GO:0055085
Accr6g01778 713 Gene3D - 540 589 IPR023408 -
Accr6g01778 713 FunFam Predicted mechanosensitive ion channel 540 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01778 Accr-Chr6 54465598 54472579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01778 25 700 Mechanosensitive Ion Channel Family AT5G12080 44.398 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01778 K22048 - qsu:112001851 947.962