Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01777 ATGGAGTTCCACAAACTCGAAATCCCCAAAACTAACAGTGACCATGTCGTCATCAACATGGATCAACAACACCAGCAACAACAAAACCCAAACCCTAAGCAAGATCATAATTCTCCTCAACCCTATCCTCGTCCCAGAAACATAACACTACAACGCCTCAATTTCTCCAAACCAAAATCACGTTTTGAGGAGATCAACTACCCAATCTCAACACCAAAACCAATTTACAATCCCATCCCAGAATCCAATGATCACCAACCAGAAAACCGTACTAACTACTCTTCCGATGACGACGACGACGACGAATGGTTCGAGAACATGGACGAGTATGGCTACGATGACGATGACGAAGCCGCCGGAAAGCGCAGAAAGAAGAGGAAGCTAAAGATCAACAAGAGAGCTTTACTTGAATGGGCTTTGTTCCTCATCATCATTACTTGCCTGATATGTTCTCTCACTATCAAATCCCTCAAGCTTAAGACTCAGTGGGGCCTACAAATCTGGAATTGGTGCTTGTTGGTGATGGTAATCTTCTGTGGCCGACTAGTCTCCGAATGGGTAGTCCGAATCCTCGTGTTTCTCATTGAACGAAACTTCATGTTGAGAGAGAAAGTACTCTACTTCGTGTACGGTCTTCGAAAGAGTTTTCAGAACTGTGTATGGCTAGCCCTAGTTTTAATCGCATGGATGATTATGTTCCACGATGCTCATAATAAAAACAAAGTCCTCAAAAAGTTCTTCAGGGCTCTCGTCGCGATCCTCGTCGGCGCAACCATATGGTTAATAAAAATAGTGCTCGTTAAGGTTCTGGCGTCGTCGTTTCATGTGGCGGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTTCATCACTATGTGTTAGAGGCGCTGTTGGGGCCGCCGTTGGACGAGGAGGAGATGGACCTGCCAAGGCGGCACTTGCAGGAGTCGAGGTCGTTGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCAGTTGAAGTCGAGGTCGAAGAAGGGAGATGGGTCAAGGAGGATTGATATAGAGAAGCTCAAGAGGCTGAGCATGGAAGGGAGAGCCACGGCGTGGAGCGTGAAGAGGTTGGTGAGCTACGTGATGTCGTCGGGGTTGTCGACGATTACGAGGACGGTAGACGGTTTTGCTGACGCCGAGTCGGAGATTAATAGTGAGTGGCAGGCTAGGACATGTGCTCAGAGGATATTCAAGAATGTTGCAAAGGAAGGATCCAAGTACATAGTAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTGTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATTACCAAGTCCTCATTCCGAAATTGGGTGGTACAAGCGTACGTAGAGAGAAAAGCATTGGCTCATTCATTGAACGATACAAAAACGGCAGTGCGTCAACTTCACAAACTGGCTAGTGCAATAGTAATAGTGATAATATTAGTGGTGTCTCTTTTGGTGATGGGTTTGGCCACAACCAAAGTCATCTTCGTCGTCACTTCTCAATTGTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTTGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTCGATGTCGGAGATCGTTGTGTCATTGATGGCATTCAGATGATTGTAGAAGAGATGAATATATTGACAACAGTGTTCTTAAGATATGACAACGAGAAAATATATTATCCAAATTCGGTTCTTCTGACGAAACCTATAAGCAATTTCAGAAGAAGCCCAGATATGGCTGACGTCGTTGAATTCACTATTGACGCCTCTACCTCCATGGACAATATCACTTCCCTCAAGAAGGCCATTCAAACCTACATTGAGAGCAAACCCAAGTACTGGAATCCAAAACATGTAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGTTCTCTACGTTCAACACACCATTAACCATCAAAACTTTGGCGAACGGAACAGCCGGCGATCAGAGCTTTTGCTGGAGCTAAAGAAGATCTTTGAGAGCCTCGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACACAGGTTAACACTGGCAACAATAATGGAGCCTTCCCACTTGAGTCTTCATAA 2145 0.4457 MEFHKLEIPKTNSDHVVINMDQQHQQQQNPNPKQDHNSPQPYPRPRNITLQRLNFSKPKSRFEEINYPISTPKPIYNPIPESNDHQPENRTNYSSDDDDDDEWFENMDEYGYDDDDEAAGKRRKKRKLKINKRALLEWALFLIIITCLICSLTIKSLKLKTQWGLQIWNWCLLVMVIFCGRLVSEWVVRILVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHNKNKVLKKFFRALVAILVGATIWLIKIVLVKVLASSFHVAAFFDRMKESVFHHYVLEALLGPPLDEEEMDLPRRHLQESRSLPARLRYEKSQQLKSRSKKGDGSRRIDIEKLKRLSMEGRATAWSVKRLVSYVMSSGLSTITRTVDGFADAESEINSEWQARTCAQRIFKNVAKEGSKYIVEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVVQAYVERKALAHSLNDTKTAVRQLHKLASAIVIVIILVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIDGIQMIVEEMNILTTVFLRYDNEKIYYPNSVLLTKPISNFRRSPDMADVVEFTIDASTSMDNITSLKKAIQTYIESKPKYWNPKHVVIVKEIENMDKMKMVLYVQHTINHQNFGERNSRRSELLLELKKIFESLGIKYRLLPQEVHLTQVNTGNNNGAFPLESS 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01777 714 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 21 703 IPR016688 -
Accr6g01777 714 SUPERFAMILY Sm-like ribonucleoproteins 531 590 IPR010920 -
Accr6g01777 714 Pfam Mechanosensitive ion channel 482 687 IPR006685 GO:0016020|GO:0055085
Accr6g01777 714 MobiDBLite consensus disorder prediction 66 101 - -
Accr6g01777 714 MobiDBLite consensus disorder prediction 22 47 - -
Accr6g01777 714 FunFam Predicted mechanosensitive ion channel 541 590 - -
Accr6g01777 714 Gene3D - 541 590 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01777 Accr-Chr6 54417720 54424194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01777 27 701 Mechanosensitive Ion Channel Family AT5G12080 45.957 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01777 K22048 - qsu:112001851 951.814