Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01766 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACAACGCCCTGATCTTCAATCCAATCATGAAGACGACAACAGGCCGGATCGGGACGAAGATGACCCTCAAGGGCTTGAGCTAGCCACTCTGAACTCGGGAGGTTCTGGCAGTGGAAGTGGCGGTGGCGGCGAGGTCAGTGCTCGCCGACCAAGGGGTCGGCCTCCCGGCTCGAAAAACAAGCTGAAACCGCCGGTGATCATCACCAGAGAAAGTGCAAACACCCTTAGGGCTCACATCCTCGAAGTCAGCAGTGGATCGGATGTGTTTGACTCGGTGGCAACCTATGCGAGGAAGGGGCAGCGAGGGATCTGCGTCCTCAGCGGCAGCGGCACCGTCACCAACGTGACCTTGCGGCAGCCAACCGCCGCCGGTGCCGTCGTGACCCTTCACGGGAGGTTCGAGATACTGTCCCTGGCTGGATCTTTTTTGCCGCCTCCGGCTCCGCCAGGTGCCACCAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTGCCTTAATAGCTGCTGGACCTGTTATTGTTATTGCTTCCTCATTTTCAAACGTTGCATATGAGAGATTGCCCTTAGATGAAGAAGAAACCCTACATATGCAGCAAGGTCAATCTTCCGGTGGTGCTGGCGGCGGTGGCGGCAACACATTCCCAGACCCATCTTCAGGGCTGCCGTTCTTCAATCTCCCCTTAAACATGCCACAGTTACCGGTTGATGGTTGGGCCGGAAACTCATCATCAGGTGGTGGGAGGCAACCATATTAG 831 0.5596 MAGLDLGSASHFVHQLQQRPDLQSNHEDDNRPDRDEDDPQGLELATLNSGGSGSGSGGGGEVSARRPRGRPPGSKNKLKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKGQRGICVLSGSGTVTNVTLRQPTAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEEETLHMQQGQSSGGAGGGGGNTFPDPSSGLPFFNLPLNMPQLPVDGWAGNSSSGGGRQPY 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01766 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 28 230 IPR014476 GO:0003680
Accr6g01766 276 Gene3D - 92 227 - -
Accr6g01766 276 MobiDBLite consensus disorder prediction 1 81 - -
Accr6g01766 276 MobiDBLite consensus disorder prediction 219 241 - -
Accr6g01766 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Accr6g01766 276 CDD DUF296 93 176 IPR005175 -
Accr6g01766 276 MobiDBLite consensus disorder prediction 21 41 - -
Accr6g01766 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 222 - -
Accr6g01766 276 ProSiteProfiles PPC domain profile profile. 89 226 IPR005175 -
Accr6g01766 276 FunFam AT-hook motif nuclear-localized protein 92 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01766 Accr-Chr6 54010307 54011137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01766 1 276 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 61.149 1.36e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01766 - - vra:106758954 387.111