Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01752 ATGCCTCCAAGGAAGAAACCCAGCTCTTCTTCCAAGAAATCGAATCCGAGCAGCGAGGCTCAACCTTCCAAGTTTGGCATTCAACATTTTTTTGAGCGCCACACCCAGAATGCTCTTCTGGCCACCCAGAAGCAGCCGAAAAATGATGTATCTGCGAACCGTCCCGTTTCTGCTCCCGAAGATTCCAAATCTGGTGATGGGTCGCAAGCTACTGCTCCAAACAATTTAGCTTCCGTTCTTTCCAGAGCTGAATATAATTTGAACTCAGACTTGGCTAGGCCAAAAACGGGGCATTCAGAATTGCAAAAGCGTAAAGGCATCCCGCCAGTTGGAGCAAGTGAATCTAATAACGTGTCGCAGAATACTCCTTCAGAGAATTTGTTAATACCAGCGTTTAATGCAGTGGAAAATCTCCCTGAGGCGTCTCCGGAAATTTCTAAGATTGTGCCCCATAAGCGCCCTAAGTTCTCGCCTGGAATGTTCATAAAACAGAGCCAGGATGATGGGTTTGATGAAGTTACATGGAAGATATCTCCTGTGAATGAAAGACTTCAAGCAGTTTCAAAACATACGCCTCAGATAATTCAAGCTTTGGCTGAGTCTTCTAGAATCAACTTATTGCCCGTTGGGATTTCCTCAGAGAATCAGACTTCTCTGACTAAAGGTGGCAAATTTGAAAAGTTACTTGCTTCACCAGCTACAAAGGCTGCTGAGAGGTCAATGGTGTCCAAGAATGAAAAAGGCTTGAAACGTATCAACCCAGACCAAGACATGGTCTTTAATGTCAGTTCAACTACTGTGAATGATTCTGGAGTAATTACTGGACAGAGCCCCTTCAGAACTCCACCATCTTTATCATATTGCTCTGATAAGGTGCAGCTAGTCAGGGATGTTGAGCACAATGGACTATCTGACCAGCTTTATTTAAGACAGCATAAAAAGGCATTGCTTGAACTGTTAGATCAAGTCGAAGATGCCATATGTGTTGAAAATTCTACAATTTGTGATAAAAGTAAAAATTACATTAAGTCTCAAGATGGAGTTGCTGATAATCTGCCCATCGGAGTTGACAGTGCAGCAGAAAGCTCAATAATTCATAAACCAAAAGAGGCCATCAGTGGATCCAATTCTAATTATCTGGTGTTGGAGGTATCTGAAAAACATAGGCTTGCTAACTCATCTGCTTTGCAAGGCCCATACAAGGTGCTTCGTTTAATAAATGAACAAACTGGAGAAGAGAAGGCTGTACACTTGTTAGAGGAATGGTCTTACAGTGTTGTTGCACCTGGAGATACTGTGAATATAATTGGTCAATTTGATGATCAGGGGCATTGTGACGTAGATCATGATAATAATTTTTTGATTGTACACCCAGATATTCTGATGTCTGGATCTCGGGTAGCTGCCAGTTTTTCTTGTCCAAGGAGAACTGTTTTAGATGAGAGACTAAAATATAATGAGTACTCAATTGCTGCATTAACTGGAACCTTAATTCACCAAGTTTTTCAGGCTGGACTTATCAAGGATAGTCTTACAATAAACTTCTTAGAGGAATATGCACGATTGGTACTACACAGAAACATTGAAAGCTTGTATGCATGTGGAGTGAATGAAAATGATGTACACAAAACCTTGATAGATGCTATCCCACGATTGTTAAATTGGATCAAACTGTTCAAGAATTTAGAGGAAAAGAAAGATGCTTATGTTGATTTTGGATGTGAAGATGGGATAAAGAAAGTCAAAATATCTGAGGTGATTGATATTGAGGAGATGGCATGGGCTCCCAAATATGGTTTGAAAGGAATGATTGATGCTTCTGTCAGTGTGAAGGTTCTACCAAAGGAAAATGAAGCAGATGAGAAGGTCATGCCATTAGAGTTCAAAACTGGGAAAGCAATGTCTTGCCAGTCATCTATAGAACACCGTGCCCAAGTGATCTTATACACTCTTCTGATGTCTGAAAGGTACCTGAAGACTATTGATTCTGGTCTTCTCTATTATCTCCAGTCAGATCTGACAGAGGGCATTATAGTTCAAAGATCTGACTTAGTTGGCCTAATCATGCGGCGTAATGAGCTTGCAAGTGATATTCTGAAGGCATTAACCACACAACAACTGCCTCCAATGTTACAGAGTCCAAGCATTTGCAGAGGTTGTCGCCATCTTAATGTCTGTAGCATTTATCATAAGGTTCAAGGAGGAAGTGCAAAGAGTAGTGGATTGGGAGATGTGTTTGATTCACATACTAATCATCTTTCTCCTACTTATTGCAAGTTCCTCTGCCATTGGGATCGGTTGATTGACTTAGAAGCAAAAGAGACTGAGCTTGCTAAGAAAGAGATGTGGCGATCACATACTTTTAGAAGTCGTAATAGTACTGGCCTTTCTTCTGTCATCCTTGATGCTTCAAATAAGATTCCGTGTCAGAAGTCTCTCAAAGATAATTGTTTCATTTATCGTTTTGTACGATGTGATCCATCTTCTCTATCTGAAGTGTCTGATGGTGATCCTTCTAATGCTTCAACAAATTATTTAGACCTCAAACTAAGAAGTGGAGACTATGTGATATTGAGCACTGAATCTAGCCGTCAAGCTATTGCCAGTGGGGTGATTACAGATATTAGTCATGCCCATGTTTCTGTTTCCTTTTCAAAGCGCTTGCGGATTCCTGGAAGCATCTCCTCTAGCCAAGATCTCTGTAAGCAGGTTTGGAGAATTGATAAGCATGAAACGGTGACTTCATTTGCTATTATGAGGTTTAATCTAGTACAACTTTTTCTCCAAAATGCTCAAAGTACTCGTCTGAGGAAAATGATTGTTGATCTTGAGGCTCCTAAATTTGACAATGGATCTATGGTCAGCCAGGACCCAGCAATATCATATGTGTGGTCACAGAAGAGTTTGAATGATGATCAGCGTAGATCAATCCTCAAGATTCTTACGGCAAAGGATTATGCACTCATACTAGGAATGCCTGGAACAGGAAAGACATCGACCATGGTTCATGCTGTGAAAGCATTATTAATCAGAGGCACATCTATTTTGCTGACAGCCTATACAAACTCAGCTGTAGATAATTTACTTATCAAATTAAAAGCTCAGGGAATTGATTTTGTACGTATTGGAAGGCTTGAAGCTGTGCATGAGGAGGTTAGAGAACACTGCCTTTCAGCAACGAATGTACAAAATGTTGATGAGATCAAACTAAGGTTTGAGCAAGTTAAAGTAGTTGCTGTTACATGTCTTGGCATCACCAGTCCCTTGCTTGCGAACAGGACTTTTGATGTATGTATTATGGACGAAGCTGGGCAGACAACTCTACCAGTGTCCTTGGGTCCTCTCATGTTTTCCTCTATGTTTGTACTTGTGGGTGATCACTATCAACTTCCTCCACTTGTCCAGAGTGCAGAGGCACGAGAGAATGGTATGGGGATAAGTTTATTTTGTCGGCTCTCAGAAGCACATCCACAAGCAATTTCAGCACTACAGAGTCAGTACCGTATGTGTCAGGGCATTATGGACCTGTCAAATGCCTTGATATATGGTGATAGGTTAAGGTGCGGTTCACCTGAGATTGCTAATGCAAAACTTGAGTTTTCTACCTTAAAATGTGGCTTATCTTGGCTAAAAAATGTTTTGAATCCAGGCAGGCCAGTGATATTCATTGATACTGATAAATTGCCAGCTCTAGAGACGAGAGAACAGAAGACTATAAATAACCCGGTTGAAGCTCACATAATAGCTGAGATAGCAATGGAATTAATAAAAAATGGGATTGGAGAAGAACATGTTGGCATTATTACACCCTACAATTCCCAGGCAAATCTCTTACGTCAGGCTGTTTGCATGACCTCGTTGGAAATTCATACCATTGACAAATACCAGGGTAGAGATAAAGATTGTATATTAGTATCTTTTGTGAGGTCTAGTGAAAATCCATCATGCTGTGCTTCTTCTCTGCTAGGAGACTGGCACAGAATAAATGTCGCTCTCACACGTGCCAAGAAAAAGCTGATCATGGTGGGTTCTTGTAGAACCCTATCAAAAGTTCCACTACTGAAGCTTCTCATAAAAAAGGTTGAGCAGCAATCAGGTATTGTTAGTGTGTCTAAGAAGGATATCTATCAGAGAGGAGAGCTCAAAAGGTGTTCCCAGATGAGATGA 4167 0.4082 MPPRKKPSSSSKKSNPSSEAQPSKFGIQHFFERHTQNALLATQKQPKNDVSANRPVSAPEDSKSGDGSQATAPNNLASVLSRAEYNLNSDLARPKTGHSELQKRKGIPPVGASESNNVSQNTPSENLLIPAFNAVENLPEASPEISKIVPHKRPKFSPGMFIKQSQDDGFDEVTWKISPVNERLQAVSKHTPQIIQALAESSRINLLPVGISSENQTSLTKGGKFEKLLASPATKAAERSMVSKNEKGLKRINPDQDMVFNVSSTTVNDSGVITGQSPFRTPPSLSYCSDKVQLVRDVEHNGLSDQLYLRQHKKALLELLDQVEDAICVENSTICDKSKNYIKSQDGVADNLPIGVDSAAESSIIHKPKEAISGSNSNYLVLEVSEKHRLANSSALQGPYKVLRLINEQTGEEKAVHLLEEWSYSVVAPGDTVNIIGQFDDQGHCDVDHDNNFLIVHPDILMSGSRVAASFSCPRRTVLDERLKYNEYSIAALTGTLIHQVFQAGLIKDSLTINFLEEYARLVLHRNIESLYACGVNENDVHKTLIDAIPRLLNWIKLFKNLEEKKDAYVDFGCEDGIKKVKISEVIDIEEMAWAPKYGLKGMIDASVSVKVLPKENEADEKVMPLEFKTGKAMSCQSSIEHRAQVILYTLLMSERYLKTIDSGLLYYLQSDLTEGIIVQRSDLVGLIMRRNELASDILKALTTQQLPPMLQSPSICRGCRHLNVCSIYHKVQGGSAKSSGLGDVFDSHTNHLSPTYCKFLCHWDRLIDLEAKETELAKKEMWRSHTFRSRNSTGLSSVILDASNKIPCQKSLKDNCFIYRFVRCDPSSLSEVSDGDPSNASTNYLDLKLRSGDYVILSTESSRQAIASGVITDISHAHVSVSFSKRLRIPGSISSSQDLCKQVWRIDKHETVTSFAIMRFNLVQLFLQNAQSTRLRKMIVDLEAPKFDNGSMVSQDPAISYVWSQKSLNDDQRRSILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKAQGIDFVRIGRLEAVHEEVREHCLSATNVQNVDEIKLRFEQVKVVAVTCLGITSPLLANRTFDVCIMDEAGQTTLPVSLGPLMFSSMFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGSPEIANAKLEFSTLKCGLSWLKNVLNPGRPVIFIDTDKLPALETREQKTINNPVEAHIIAEIAMELIKNGIGEEHVGIITPYNSQANLLRQAVCMTSLEIHTIDKYQGRDKDCILVSFVRSSENPSCCASSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIKKVEQQSGIVSVSKKDIYQRGELKRCSQMR 1388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01752 1388 Gene3D - 1067 1166 IPR027417 -
Accr6g01752 1388 Gene3D - 911 1060 IPR027417 -
Accr6g01752 1388 CDD SF1_C_Upf1 1169 1362 IPR047187 -
Accr6g01752 1388 Gene3D - 1167 1380 IPR027417 -
Accr6g01752 1388 FunFam DNA replication helicase Dna2 573 727 - -
Accr6g01752 1388 Pfam AAA domain 1146 1345 IPR041679 -
Accr6g01752 1388 Pfam DNA replication factor Dna2 408 610 IPR014808 -
Accr6g01752 1388 Pfam AAA domain 1072 1136 IPR041677 GO:0004386
Accr6g01752 1388 Pfam AAA domain 969 1059 IPR041677 GO:0004386
Accr6g01752 1388 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 968 1353 IPR027417 -
Accr6g01752 1388 MobiDBLite consensus disorder prediction 7 24 - -
Accr6g01752 1388 PANTHER DNA2/NAM7 HELICASE FAMILY 141 1364 IPR045055 -
Accr6g01752 1388 Gene3D - 843 910 - -
Accr6g01752 1388 MobiDBLite consensus disorder prediction 1 73 - -
Accr6g01752 1388 CDD DNA2_N-like 463 698 - -
Accr6g01752 1388 FunFam DNA replication helicase 1167 1380 - -
Accr6g01752 1388 Gene3D - 463 727 IPR011604 -
Accr6g01752 1388 CDD DEXXQc_DNA2 968 1168 IPR026851 GO:0017116
Accr6g01752 1388 FunFam DNA replication helicase Dna2 903 1166 - -
Accr6g01752 1388 MobiDBLite consensus disorder prediction 35 73 - -
Accr6g01752 1388 MobiDBLite consensus disorder prediction 91 124 - -
Accr6g01752 1388 Pfam Domain of unknown function DUF83 618 727 IPR022765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01752 Accr-Chr6 53307561 53321459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01752 1 1110 Core DNA Replication Machinery Family AT1G08840 54.982 0.0 1122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01752 K10742 - cave:132181879 1833.15