Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01742 ATGTTTGGGCGTCCACCAACAAGGAGTGATAACACCAAATATTATGAAATTCTTGGTGTTTCAAAAAGTGCTAGCCAAGATGAACTCAAGAAAGCCTATAAAAAGGCTGCAATCAAGAATCATCCAGATAAAGGTGGAGACCCTGAAAAGTTCAAGGAGTTAGCTCAAGCCTATGAAGTGCTCAGTGATCCTGAAAAGAGAGAAGTGTATGATCAGTATGGTGAAGATGCCCTTAAAGATGGAATGGGAGGAGGAGGAGGTGGCCCATTTCATAATCCATTTGATATATTTGAGTCATTCTTTGGTGCGTCATCCTTTGGTGGCGGCAGTAGTTCACGTGGAAGGAGGAAGAAACACGGTGAAGATGTGGTGCAAACTTTGAAGGTTTCTCTGGAGGATCTATACAATGGCACCACTAAGAAATTATCTCTTTCTAGAAACGTGATTTGCTCAAAATGTAAAGGGAAAGGTTCAAAAAGTGGAAATGCAGGAAGATGCTATGGATGTCAAGGCTCTGGTATGAAGGTTACAACAAGGCAGATTGGTCTGGGTATGATTCAACAAATGCAGCATGTCTGTCCCGATTGCAGAGGAAGTGGTGAGGTCATTAGCGAGAGAGATAAATGCCCTCAGTGCAAGGCAAACAAAGTCACCCAGGAAAAGAAGGTGCTAGAGGTGCATGTTGAGAAAGGGATGCAACAGGGTCAGAAAATTGTTTTTGAAGGACAAGCTGATGAAGCTCCGGACACAATTGCAGGAGACATTGTTTTTGTCATACAAGTAAAGGAACACCCCAAGTTCAAGAGGAAGCATGACGACCTCTATGTTGAGCATAACCTGAGTTTAACTGAGGCACTTTGCGGTTTCCAGTTTGTCATTACCCATATGGATGGGAGGCAACTCTTGATCAAATCACACCCAGGGGAAGTCATCAAGCCAGGTCAACATAAAGCGATAAATGATGAGGGAATGCCACATCATAATAGGCCCTTCATGAGGGGCCGTCTGTACATCCAATTTAATGTTGACTTCCCAGACTCAGGGTTCCTCAGCCCTGACCAATGTCGGGTATTAGAAACTGTGTTACCTCGTAAACCAAGCAAGCAGTTGACTGATATGGAGCTGGATGATTGTGAGGAAACTACTCTGCATGATGTCAACATTGAGGAGGAGATGAACCGAAAGAAGCAACAGCAATATCGTGAGGCATACGATGATGATGATGATGATGAGCCATCAATGCCTCGAGTGCAGTGTGCTCAGCAGTAA 1269 0.4405 MFGRPPTRSDNTKYYEILGVSKSASQDELKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREVYDQYGEDALKDGMGGGGGGPFHNPFDIFESFFGASSFGGGSSSRGRRKKHGEDVVQTLKVSLEDLYNGTTKKLSLSRNVICSKCKGKGSKSGNAGRCYGCQGSGMKVTTRQIGLGMIQQMQHVCPDCRGSGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQQGQKIVFEGQADEAPDTIAGDIVFVIQVKEHPKFKRKHDDLYVEHNLSLTEALCGFQFVITHMDGRQLLIKSHPGEVIKPGQHKAINDEGMPHHNRPFMRGRLYIQFNVDFPDSGFLSPDQCRVLETVLPRKPSKQLTDMELDDCEETTLHDVNIEEEMNRKKQQQYREAYDDDDDDEPSMPRVQCAQQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01742 422 CDD DnaJ 14 63 IPR001623 -
Accr6g01742 422 Pfam DnaJ domain 13 71 IPR001623 -
Accr6g01742 422 Gene3D - 264 346 - -
Accr6g01742 422 Gene3D - 150 216 - -
Accr6g01742 422 Pfam DnaJ central domain 150 215 IPR001305 GO:0031072|GO:0051082
Accr6g01742 422 Gene3D DnaJ domain 10 111 IPR036869 -
Accr6g01742 422 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Accr6g01742 422 FunFam DnaJ subfamily A member 2 150 216 - -
Accr6g01742 422 PRINTS DnaJ domain signature 15 33 IPR001623 -
Accr6g01742 422 PRINTS DnaJ domain signature 66 85 IPR001623 -
Accr6g01742 422 PRINTS DnaJ domain signature 46 66 IPR001623 -
Accr6g01742 422 Pfam DnaJ C terminal domain 125 345 IPR002939 -
Accr6g01742 422 SUPERFAMILY HSP40/DnaJ peptide-binding domain 267 347 IPR008971 GO:0006457|GO:0051082
Accr6g01742 422 FunFam dnaJ protein homolog 10 111 - -
Accr6g01742 422 CDD DnaJ_C 121 347 - -
Accr6g01742 422 Hamap Chaperone protein DnaJ [dnaJ]. 10 378 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Accr6g01742 422 ProSiteProfiles Zinc finger CR-type profile. 137 221 IPR001305 GO:0031072|GO:0051082
Accr6g01742 422 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 219 IPR036410 -
Accr6g01742 422 Gene3D - 112 263 - -
Accr6g01742 422 MobiDBLite consensus disorder prediction 383 403 - -
Accr6g01742 422 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 403 IPR044713 GO:0006457|GO:0030544
Accr6g01742 422 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Accr6g01742 422 CDD DnaJ_zf 150 213 IPR001305 GO:0031072|GO:0051082
Accr6g01742 422 SUPERFAMILY Chaperone J-domain 8 108 IPR036869 -
Accr6g01742 422 FunFam DnaJ subfamily A member 2 264 346 - -
Accr6g01742 422 SMART dnaj_3 12 66 IPR001623 -
Accr6g01742 422 MobiDBLite consensus disorder prediction 383 422 - -
Accr6g01742 422 SUPERFAMILY HSP40/DnaJ peptide-binding domain 121 265 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01742 Accr-Chr6 53048755 53051540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01742 7 73 C2H2 Transcription Factor Family AT1G74250 43.421 1.51e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01742 K09503 - qsu:111993019 701.049