Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01741 ATGGAAAGAGATAATAACTTCTCTACCAGACCCTCCTCTTCACCGTCTTCTCCATCTTCATCATCAACGTCAACTTCAGCAACAGTTTCAGGTTTGAAATTCAAGCATGATCAGTCTGAAAACGGTGATCTGAATGGTAAGCACCAGAAAAGCAAGAAGAAGAAGAGACAGAGAAGTGAGAGTGATGATGATGATACTAATGAAGGGAATAATAATGATAAGCATTCTACTTACAGAGGTGTGAGAATGAGAGTTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAGAAGTCAAGAATTTGGCTCGGAACATTTCCAACTGCGGAAATGGCGGCTCGGGCCCATGATGTAGCCGCTTTAGCCATCAAAGGTCAATCGGCTTTCCTCAATTTCCCAGAACTGGCTCACCGGCTTCCCCGTCCAGCCAGCTCAGCTCCCAAGGACATCCAGGCCGCAGCTTCAAAGGCGGCGGCAGCTACCACCACCGTGTTCGATGACGTCAAACACTGTCAAGCCGAGGCAGAAGCCAGAGTAGCCGAGCCGAACCAGGCAGAACGGGTCATTTCATCATCATCATCATCTTCTTCTTCTACAAGTTCTGTTCCTGAGGATGAAAACACGTTGTTTGACCTACCAGATCTCTTCACTGATGGGGACATTAATGGAGTCTGCTCATATTCTTCTTGGAATTTATGTGCAGTAGTTGATAGTGGTTTAAGCCTTGATGAGCCATTTTTATTATGGGAGAAATATTAA 762 0.4567 MERDNNFSTRPSSSPSSPSSSSTSTSATVSGLKFKHDQSENGDLNGKHQKSKKKKRQRSESDDDDTNEGNNNDKHSTYRGVRMRVWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGQSAFLNFPELAHRLPRPASSAPKDIQAAASKAAAATTTVFDDVKHCQAEAEARVAEPNQAERVISSSSSSSSSTSSVPEDENTLFDLPDLFTDGDINGVCSYSSWNLCAVVDSGLSLDEPFLLWEKY 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01741 253 MobiDBLite consensus disorder prediction 56 79 - -
Accr6g01741 253 MobiDBLite consensus disorder prediction 1 79 - -
Accr6g01741 253 FunFam Ethylene-responsive transcription factor 2 76 135 - -
Accr6g01741 253 CDD AP2 76 136 IPR001471 GO:0003700|GO:0006355
Accr6g01741 253 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Accr6g01741 253 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Accr6g01741 253 MobiDBLite consensus disorder prediction 186 206 - -
Accr6g01741 253 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Accr6g01741 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 53 219 - -
Accr6g01741 253 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Accr6g01741 253 MobiDBLite consensus disorder prediction 177 206 - -
Accr6g01741 253 Pfam AP2 domain 78 126 IPR001471 GO:0003700|GO:0006355
Accr6g01741 253 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Accr6g01741 253 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Accr6g01741 253 MobiDBLite consensus disorder prediction 7 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01741 Accr-Chr6 53025852 53026613 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01741 70 251 AP2-EREBP Transcription Factor Family AT2G44940 54.808 4.33e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr6g01741 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01741 - - pcin:129289175 274.248