Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01740 ATGGAAAGAGATAATAGCTTCTCTACCACACCCTCCTCTTTATTTTGTTCTCCATCTTCATCATCAACGTCAACTTCAGCAACAGTTTCAAGTTTGAAATTCAAGTATGATCAGTCTGAAAATGGTGATCTGAATGGTAAGCACCAGAAATGCAAGAAGAAGAAGAGACAGAGAAGTGAGAGTGAAGATGATGATAATAATACTGATGAAGTGAATAATAATAATGATGATAAACATCCTACTTACAGAGGTGTGAGAATGAGAGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAGAAGTCAAGAATTTGGCTCGGAACATATCCAACTGCGGAAATGGCGGCTCGGGCCCATGATGTAGCCGCTTTAGCCATCAAAGGTCAATCGGCTTTCCTCAATTTCCCAGAACTGGCTCACCGGCTTCCCCGTCCAGCCAGCTCAGCTCCCAAGGACATCCAGGCCGCGGCTTCAAAGGCGGCGGCAGCCACCTCCACCGTGTTCGATGACGTCAAACACTGTCAAGCTGATGCAGAAGCCAGAGTAACCGAGCCGAACCAGGCAGAATTGGTCACTTCATCTTCTTCTTCTTCAAGTTCTGTTCCTGAGGATGAAGACACATTGTTTGACCTACCAGATCTCTTCACTGATGGGGACATTAATGGAGTCTGCTCATATTCTTCTTGGAATTTATGTGCAGTAGTTGATAGTGGTTTAAGCCTTGATGAGCCATTTTTATTATGGGAGAAATATTAA 762 0.4436 MERDNSFSTTPSSLFCSPSSSSTSTSATVSSLKFKYDQSENGDLNGKHQKCKKKKRQRSESEDDDNNTDEVNNNNDDKHPTYRGVRMRAWGKWVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGQSAFLNFPELAHRLPRPASSAPKDIQAAASKAAAATSTVFDDVKHCQADAEARVTEPNQAELVTSSSSSSSSVPEDEDTLFDLPDLFTDGDINGVCSYSSWNLCAVVDSGLSLDEPFLLWEKY 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01740 253 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
Accr6g01740 253 Pfam AP2 domain 80 130 IPR001471 GO:0003700|GO:0006355
Accr6g01740 253 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Accr6g01740 253 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Accr6g01740 253 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Accr6g01740 253 SUPERFAMILY DNA-binding domain 81 139 IPR016177 GO:0003677
Accr6g01740 253 MobiDBLite consensus disorder prediction 188 206 - -
Accr6g01740 253 MobiDBLite consensus disorder prediction 1 83 - -
Accr6g01740 253 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Accr6g01740 253 FunFam Ethylene-responsive transcription factor 2 80 139 - -
Accr6g01740 253 MobiDBLite consensus disorder prediction 185 207 - -
Accr6g01740 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 59 219 - -
Accr6g01740 253 Gene3D AP2/ERF domain 81 139 IPR036955 GO:0003700|GO:0006355
Accr6g01740 253 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01740 Accr-Chr6 52982903 52983664 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01740 74 251 AP2-EREBP Transcription Factor Family AT2G44940 54.369 2.65e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr6g01740 AP2 7.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01740 - - pcin:129289175 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g01740 6 52982903 52983664 Accr6g01740 6 52982903 52983664 ECH