Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01698 ATGTCTGATAATTATTTACCCTCAGAAATTGTGTTGGAAATTCTTCACAGACTACCCGTCAAGTCTCTTGTGAAATTCACCTCTGTTTGTAGGGCTTGGAATTCCCTCATCACAGATCGAACTTTCATATCTGATCATCTCAGCCGTACATTAATTCAAGCTTCCAATGGCCACAAAGGCTCCCTCTTTTTTCAATTTTGTCTTGGAAGAAACTTAAGGTGGCATGAGCCTCCTAGAGAGTATGCTTACTCACTGTACTCAACTACTAATCAACAAACTGATCATCACTTCTCAGTTCAAAGATTCCCGCTCCCTTGTCTATCTTTTCAACCAGATCATTGTGCATGGTTTGGTGGCGCATGCAATGGCCTTGTAAGTTCTGCTCACCATTCACGATCATCAGGTTCCGTAACTTTCCTTATTTGGAATCCCTTACTTCGAAAATATGTGGTGCTTCCCAAACCACTCATGACCCGCAACAGAGATGTGTATATTAGATATTTTGGGCTTGGTTTTGATTCGAGGAACAACGATTATAAAGTCGTTGTACTCATGCAAACTCACTCTGGACAAGAGAATGATCACCTTGAGGTGTACTCTCTTGTTTCTCGTTCTTGGAGGAGTGTTGCTATTAGTGTTCCTAAGTTTTTCCTTGATGTTGAATTTAGGTCTCTCCCGTTGTTTGTGAATGGTGCAATGCATTGGGTTATTCACCGCATGAAAGATGGTTCAATTCAGCGGTCTATTTTATCATTTGATGTGACTGAAGAGACATTTGGAGAACTAACATTACCATTACAGTCAAACGAAAAATCTAATATATCAACAACGTTACTTGTTGTGGAAGGAGGCGGTAGGCTTGCTGTGGTGAATCATCCTAGAAAAGGGACCGGATGTTTTTTGCATATTTGGGTGATGAAAGAATATGGTGTTACTGATTCATGGACTGAAATATTGCATTTGCCTTGTGGAGCAAGACGTTGTACGGGAAGAAGATTAGACGTATTAGCTCTAACTAGCAATGGAAAAGGGATCATGCGCCGTCTTGACGGAGGAGCTATAGTTTTAGTTGATCCAACCAAGAAATCAATGGAACTTATGGGACAGAAAGCTGATGCAGCTTATACGGGATGTTATGTTGAGAGTTTGTTTTTCATAAACAAAGAATTTGATGCTTTGTCTTTCTGA 1188 0.4032 MSDNYLPSEIVLEILHRLPVKSLVKFTSVCRAWNSLITDRTFISDHLSRTLIQASNGHKGSLFFQFCLGRNLRWHEPPREYAYSLYSTTNQQTDHHFSVQRFPLPCLSFQPDHCAWFGGACNGLVSSAHHSRSSGSVTFLIWNPLLRKYVVLPKPLMTRNRDVYIRYFGLGFDSRNNDYKVVVLMQTHSGQENDHLEVYSLVSRSWRSVAISVPKFFLDVEFRSLPLFVNGAMHWVIHRMKDGSIQRSILSFDVTEETFGELTLPLQSNEKSNISTTLLVVEGGGRLAVVNHPRKGTGCFLHIWVMKEYGVTDSWTEILHLPCGARRCTGRRLDVLALTSNGKGIMRRLDGGAIVLVDPTKKSMELMGQKADAAYTGCYVESLFFINKEFDALSF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01698 395 Pfam F-box-like 5 40 IPR001810 GO:0005515
Accr6g01698 395 NCBIfam F-box protein interaction domain 120 323 IPR017451 -
Accr6g01698 395 ProSiteProfiles F-box domain profile. 1 51 IPR001810 GO:0005515
Accr6g01698 395 Pfam F-box associated 227 322 IPR006527 -
Accr6g01698 395 SMART fbox_2 6 46 IPR001810 GO:0005515
Accr6g01698 395 SUPERFAMILY F-box domain 5 66 IPR036047 GO:0005515
Accr6g01698 395 CDD F-box_AtFBW1-like 4 42 - -
Accr6g01698 395 PANTHER BNACNNG10540D PROTEIN 4 322 - -
Accr6g01698 395 Gene3D - 4 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01698 Accr-Chr6 51550510 51551697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01698 175 331 Carbohydrate Esterase AT1G25141 28.125 5.70e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01698 - - pcin:129288916 306.219